6OIT

CryoEM structure of Arabidopsis DDR' complex (DRD1 peptide-DMS3-RDM1)

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A, B	Protein RDM1	polymer	175	20072.4	2	UniProt (Q9LUJ3) Pfam (PF09187) In PDB	Arabidopsis thaliana (Mouse-ear cress)	Protein RNA-directed DNA methylation 1
2	C, D, E, F	Protein DEFECTIVE IN MERISTEM SILENCING 3	polymer	449	49821.4	4	UniProt (Q94A79) In PDB	Arabidopsis thaliana (Mouse-ear cress)	Protein INVOLVED IN DE NOVO 1
3	G	Protein CHROMATIN REMODELING 35	polymer	71	7915.8	1	UniProt (Q9SIW2) In PDB	Arabidopsis thaliana (Mouse-ear cress)	Protein DEFECTIVE IN MERISTEM SILENCING 1,Protein DEFECTIVE IN RNA-DIRECTED DNA METHYLATION 1

Sequence modifications

A, B: 3 - 163 (UniProt: Q9LUJ3)

PDB	External Database	Details
Met -11	-	initiating methionine
Gly -10	-	expression tag
Ser -9	-	expression tag
Ser -8	-	expression tag
His -7	-	expression tag
His -6	-	expression tag
His -5	-	expression tag
His -4	-	expression tag
His -3	-	expression tag
His -2	-	expression tag
Ser -1	-	expression tag
Gln 0	-	expression tag
Asp 1	-	expression tag
Pro 2	-	expression tag

C, D, E, F: 2 - 420 (UniProt: Q94A79)

PDB	External Database	Details
Met -2	-	initiating methionine
Ala -1	-	expression tag
Asp 0	-	expression tag
Leu 1	-	expression tag
Gly 421	-	expression tag
Thr 422	-	expression tag
Leu 423	-	expression tag
Glu 424	-	expression tag
Ser 425	-	expression tag
Gly 426	-	expression tag
Lys 427	-	expression tag
Glu 428	-	expression tag
Thr 429	-	expression tag
Ala 430	-	expression tag
Ala 431	-	expression tag
Ala 432	-	expression tag
Lys 433	-	expression tag
Phe 434	-	expression tag
Glu 435	-	expression tag
Arg 436	-	expression tag
Gln 437	-	expression tag
His 438	-	expression tag
Met 439	-	expression tag
Asp 440	-	expression tag
Ser 441	-	expression tag
Ser 442	-	expression tag
Thr 443	-	expression tag
Ser 444	-	expression tag
Ala 445	-	expression tag
Ala 446	-	expression tag

G: 45 - 99 (UniProt: Q9SIW2)

PDB	External Database	Details
Gly 42	-	expression tag
Glu 43	-	expression tag
Phe 44	-	expression tag
Gly 100	-	expression tag
Gly 101	-	expression tag
Gly 102	-	expression tag
Gly 103	-	expression tag
Ser 104	-	expression tag
Asp 105	-	expression tag
Tyr 106	-	expression tag
Lys 107	-	expression tag
Asp 108	-	expression tag
Asp 109	-	expression tag
Asp 110	-	expression tag
Asp 111	-	expression tag
Lys 112	-	expression tag

Contents of the asymmetric unit

Polymers	Number of chains	7
	Total formula weight	247346.0
All*	Total formula weight	247346.0

*Water molecules are not included.