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6OHY

Chimpanzee SIV Env trimeric ectodomain.

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, C, E
(A, C, D)
Envelope glycoprotein gp160polymer45751708.73UniProt (Q1A234)
Pfam (PF00516)
Simian immunodeficiency virus (SIV)
2B, D, F
(B, E, F)
Envelope glycoprotein gp160polymer15117179.53UniProt (Q1A234)
Pfam (PF00517)
Simian immunodeficiency virus (SIV)
3CA, G, GA, HA, IA...
(c, G, g, h, i...)
alpha-L-fucopyranose-(1-6)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched367.312In PDB
GlyTouCan (G86851RC)
4AA, DA, EA, FA, H...
(a, d, e, f, H...)
2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched424.424In PDB
GlyTouCan (G42666HT)
5J, LA, X
(J, l, X)
2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranosebranched570.53In PDB
GlyTouCan (G21290RB)
6BA, N, PA
(b, N, p)
alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched1235.13In PDB
GlyTouCan (G97423PY)
7AB, BB, CB, DB, EB...
(A, B, C, E, D...)
2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.224Chemie (NAG)
Sequence modifications
A, C, D: 32 - 504 (UniProt: Q1A234)
PDBExternal DatabaseDetails
Lys 171Gln 170engineered mutation
Cys 501Ser 488conflict
B, E, F: 515 - 664 (UniProt: Q1A234)
PDBExternal DatabaseDetails
Pro 559Ile 550conflict
Cys 605Pro 596conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains6
Total formula weight206664.5
BranchedNumber of molecules42
Total formula weight20010.8
Non-Polymers*Number of molecules24
Total formula weight5309.0
All*Total formula weight231984.2
*Water molecules are not included.

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PDB entries from 2024-11-20

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