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6OGZ

In situ structure of Rotavirus RNA-dependent RNA polymerase at transcript-elongated state

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(B)
RNA (5'-R(P*UP*AP*UP*AP*UP*AP*UP*AP*UP*AP*UP*AP*UP*AP*UP*AP*UP*A)-3')polymer185673.41Rotavirus A
2B
(C)
RNA (5'-R(P*AP*UP*AP*UP*AP*UP*AP*UP*AP*UP*AP*UP*AP*UP*AP*UP*A)-3')polymer175367.21Rotavirus A
3C
(A)
RNA-dependent RNA polymerase of rotavirus Apolymer1088125276.31UniProt (G0YZJ9)
Pfam (PF02123)
Pfam (PF12289)
Rotavirus AProtein VP1
4D, E, F, G, H...
(E, F, G, I, H...)
Inner capsid protein VP2polymer887103426.010UniProt (G0YZK0)
Pfam (PF05087)
Rotavirus Acapsid shell protein of rotavirus A
5N
(A)
URIDINE 5'-TRIPHOSPHATEnon-polymer484.11Chemie (UTP)
6O
(A)
GUANOSINE-5'-TRIPHOSPHATEnon-polymer523.21Chemie (GTP)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains13
Total formula weight1170576.8
Non-Polymers*Number of molecules2
Total formula weight1007.3
All*Total formula weight1171584.2
*Water molecules are not included.

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PDB entries from 2025-06-25

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