6O8E
Crystal structure of UvrB bound to duplex DNA with ADP
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B | UvrABC system protein B | polymer | 593 | 68143.4 | 2 | UniProt (P56981) Pfam (PF04851) Pfam (PF17757) Pfam (PF00271) Pfam (PF12344) In PDB | Bacillus caldotenax | Protein UvrB,Excinuclease ABC subunit B |
2 | C, E | DNA (5'-D(*GP*CP*TP*CP*TP*AP*GP*AP*TP*TP*TP*TP*CP*AP*TP*AP*CP*GP*GP*C)-3') | polymer | 20 | 6100.0 | 2 | synthetic construct | ||
3 | D, F | DNA (5'-D(*GP*CP*CP*GP*TP*AP*TP*GP*CP*CP*AP*AP*TP*CP*TP*AP*GP*AP*GP*C)-3') | polymer | 20 | 6119.0 | 2 | synthetic construct | ||
4 | A, B | ADENOSINE-5'-DIPHOSPHATE | non-polymer | 427.2 | 2 | Chemie (ADP) | |||
5 | A, B | PHOSPHATE ION | non-polymer | 95.0 | 4 | Chemie (PO4) | |||
6 | A, B | MAGNESIUM ION | non-polymer | 24.3 | 4 | Chemie (MG) | |||
7 | A, B, F | CHLORIDE ION | non-polymer | 35.5 | 5 | Chemie (CL) | |||
8 | water | water | 18.0 | 16 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 593 (UniProt: P56981)
PDB | External Database | Details |
---|---|---|
Ser 144 | Cys 145 | conflict |
Arg 190 | - | insertion |
Ser 211 | Cys 211 | conflict |
Glu 233 | Lys 233 | conflict |
Cys 251 | Thr 251 | conflict |
Ser 303 | Cys 303 | conflict |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 6 |
Total formula weight | 160724.7 | |
Non-Polymers* | Number of molecules | 15 |
Total formula weight | 1508.8 | |
All* | Total formula weight | 162233.5 |