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6NZO

Set2 bound to nucleosome

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, EHistone H3polymer13615437.12UniProt (A0A310TTQ1)
Pfam (PF00125)
UniProt (by SIFTS) (P02302)
In PDB
Xenopus laevis (African clawed frog)
2B, FHistone H4polymer10311394.42UniProt (P62799)
Pfam (PF15511)
In PDB
Xenopus laevis (African clawed frog)
3C, GUbiquitin-60S ribosomal protein L40,Histone H2Apolymer22124045.42UniProt (P0CH09)
UniProt (Q6AZJ8)
Pfam (PF00240)
Pfam (PF00125)
Pfam (PF16211)
UniProt (by SIFTS) (P06897)
In PDB
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
4D, HHistone H2B 1.1polymer12313655.92UniProt (P02281)
Pfam (PF00125)
In PDB
Xenopus laevis (African clawed frog)H2B1.1
5IDNA (149-MER)polymer14945764.11synthetic construct
6JDNA (149-MER)polymer14946222.41synthetic construct
7SHistone-lysine N-methyltransferasepolymer939105425.91UniProt (G0S676)
Pfam (PF00397)
Pfam (PF08236)
Pfam (PF17907)
Pfam (PF00856)
Pfam (PF08711)
In PDB
Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719)
8SZINC IONnon-polymer65.43Chemie (ZN)
Sequence modifications
A, E: 0 - 135 (UniProt: A0A310TTQ1)
PDBExternal DatabaseDetails
Met 36Lys 37engineered mutation
C, G: -71 - 3 (UniProt: P0CH09)
PDBExternal DatabaseDetails
Met -91-initiating methionine
Asp -90-expression tag
Ser -89-expression tag
Pro -88-expression tag
Asp -87-expression tag
Leu -86-expression tag
His -85-expression tag
His -84-expression tag
His -83-expression tag
His -82-expression tag
His -81-expression tag
His -80-expression tag
Gly -79-expression tag
Thr -78-expression tag
Leu -77-expression tag
Val -76-expression tag
Pro -75-expression tag
Arg -74-expression tag
Gly -73-expression tag
Ser -72-expression tag
Thr 4-linker
Ser 5-linker
Ser 6-linker
Gly 7-linker
Gly 8-linker
Ser 9-linker
Gly 10-linker
Gly 11-linker
Ser 12-linker
Gly 13-linker
Gly 14-linker
Ser 15-linker
Gly 16-linker
C, G: 17 - 129 (UniProt: Q6AZJ8)
D, H: 1 - 122 (UniProt: P02281)
PDBExternal DatabaseDetails
Met 0-initiating methionine
Thr 29Ser 33engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains11
Total formula weight326478.4
Non-Polymers*Number of molecules3
Total formula weight196.2
All*Total formula weight326674.6
*Water molecules are not included.

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PDB entries from 2024-07-24

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