6NY5
Crystal structure of the PUM-HD domain of S. pombe Puf1 in complex with RNA
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Pumilio domain-containing protein C56F2.08c | polymer | 389 | 44634.6 | 2 | UniProt (O60059) Pfam (PF00806) | Schizosaccharomyces pombe (Fission yeast) | Puf1 |
| 2 | C (C) | RNA (5'-R(P*UP*UP*AP*AP*UP*AP*AP*CP*UP*UP*AP*AP*U)-3') | polymer | 13 | 4072.5 | 1 | Schizosaccharomyces pombe | ||
| 3 | D, E, F, G, H (A, B) | SULFATE ION | non-polymer | 96.1 | 5 | Chemie (SO4) | |||
| 4 | I (C) | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) | |||
| 5 | J, K, L (A, B, C) | water | water | 18.0 | 25 | Chemie (HOH) |
Sequence modifications
A, B: 109 - 485 (UniProt: O60059)
| PDB | External Database | Details |
|---|---|---|
| Ser 97 | - | expression tag |
| Glu 98 | - | expression tag |
| Phe 99 | - | expression tag |
| Glu 100 | - | expression tag |
| Leu 101 | - | expression tag |
| Arg 102 | - | expression tag |
| Arg 103 | - | expression tag |
| Gln 104 | - | expression tag |
| Ala 105 | - | expression tag |
| Cys 106 | - | expression tag |
| Gly 107 | - | expression tag |
| Arg 108 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 93341.6 | |
| Non-Polymers* | Number of molecules | 6 |
| Total formula weight | 504.6 | |
| All* | Total formula weight | 93846.2 |
