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6NN0

Crystal structure of Mycobacterium tuberculosis dethiobiotin synthetase in complex with 2'-deoxycytidine and fragment degradation product B9D

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D
(A, B, C, D)
ATP-dependent dethiobiotin synthetase BioDpolymer23323285.74UniProt (P9WPQ5)
Pfam (PF13500)
Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)DTB synthetase,DTBS,Dethiobiotin synthase
2E, H, I, M, N...
(A, B, C, D)
SULFATE IONnon-polymer96.17Chemie (SO4)
3F, K, O, T
(A, B, C, D)
[(1S,2R)-2-(2-hydroxybenzene-1-carbonyl)cyclopentyl]acetic acidnon-polymer248.34Chemie (KSJ)
4G, L, P, U
(A, B, C, D)
[(1R,2S)-2-(2-hydroxybenzene-1-carbonyl)cyclopentyl]acetic acidnon-polymer248.34Chemie (KSP)
5J, S
(B, D)
4-AMINO-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONEnon-polymer243.22Chemie (CTN)
6V, W, X, Y
(A, B, C, D)
waterwater18.0184Chemie (HOH)
Sequence modifications
A, B, C, D: 2 - 226 (UniProt: P9WPQ5)
PDBExternal DatabaseDetails
His -6-expression tag
His -5-expression tag
His -4-expression tag
His -3-expression tag
His -2-expression tag
His -1-expression tag
Gly 0-expression tag
Gly 1-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight93142.7
Non-Polymers*Number of molecules17
Total formula weight3145.1
All*Total formula weight96287.7
*Water molecules are not included.

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PDB entries from 2024-11-06

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