6NJD
Crystal structure of RavD (residues 1-200) from Legionella pneumophila (strain Corby) complexed with Met-1 linked di-ubiquitin
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C (A, C) | Di-ubiquitin | polymer | 157 | 17607.2 | 2 | UniProt (F5H747) Pfam (PF00240) | Homo sapiens (Human) | |
| 2 | B, D (B, D) | RavD | polymer | 205 | 22939.1 | 2 | UniProt (by SIFTS) (A0A509GV61) | Legionella pneumophila | |
| 3 | E, F (A, B) | MAGNESIUM ION | non-polymer | 24.3 | 2 | Chemie (MG) | |||
| 4 | G, H, I, J (A, B, C, D) | water | water | 18.0 | 275 | Chemie (HOH) |
Sequence modifications
A, C: 1 - 152 (UniProt: F5H747)
| PDB | External Database | Details |
|---|---|---|
| Gly -4 | - | expression tag |
| Pro -3 | - | expression tag |
| Leu -2 | - | expression tag |
| Gly -1 | - | expression tag |
| Ser 0 | - | expression tag |
| Ser 75 | Gly 75 | engineered mutation |
| Ser 76 | Gly 76 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 81092.5 | |
| Non-Polymers* | Number of molecules | 2 |
| Total formula weight | 48.6 | |
| All* | Total formula weight | 81141.1 |
