6NFE
Crystal Structure of Ribose-phosphate Pyrophosphokinase from Legionella pneumophila with bound AMP, ADP, and Ribose-5-Phosphate
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Ribose-phosphate pyrophosphokinase | polymer | 323 | 35199.7 | 2 | UniProt (A0A2S6FBX1) Pfam (PF13793) Pfam (PF14572) UniProt (by SIFTS) (Q5ZY30) | Legionella pneumophila | RPPK,5-phospho-D-ribosyl alpha-1-diphosphate,Phosphoribosyl diphosphate synthase,Phosphoribosyl pyrophosphate synthase,PRPPase |
| 2 | C, F, I, K, L... (A, B) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 11 | Chemie (EDO) | |||
| 3 | D, G, U (A, B) | ETHANOL | non-polymer | 46.1 | 3 | Chemie (EOH) | |||
| 4 | E, T (A, B) | 5-O-phosphono-alpha-D-ribofuranose | non-polymer | 230.1 | 2 | Chemie (HSX) | |||
| 5 | H, J (A) | ADENOSINE MONOPHOSPHATE | non-polymer | 347.2 | 2 | Chemie (AMP) PubChem (224) PubChem (34768) PubChem (83862) PubChem (446048) PubChem (515384) PubChem (638042) PubChem (5316444) PubChem (5742864) PubChem (12163610) PubChem (12358355) PubChem (16397049) PubChem (16760266) PubChem (40467049) PubChem (40469468) PubChem (44348067) PubChem (45358029) PubChem (46874558) PubChem (40459109) PubChem (46875232) PubChem (177678969) PubChem (6083) PubChem (1549371) PubChem (92144436) PubChem (57358045) PubChem (57879893) PubChem (57879902) PubChem (12358354) PubChem (122197642) PubChem (162290139) PubChem (162946266) PubChem (171699505) | |||
| 6 | N, P (A, B) | ADENOSINE-5'-DIPHOSPHATE | non-polymer | 427.2 | 2 | Chemie (ADP) | |||
| 7 | W, X (A, B) | water | water | 18.0 | 524 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 315 (UniProt: A0A2S6FBX1)
| PDB | External Database | Details |
|---|---|---|
| Met -7 | - | initiating methionine |
| Ala -6 | - | expression tag |
| His -5 | - | expression tag |
| His -4 | - | expression tag |
| His -3 | - | expression tag |
| His -2 | - | expression tag |
| His -1 | - | expression tag |
| His 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 70399.4 | |
| Non-Polymers* | Number of molecules | 20 |
| Total formula weight | 2830.0 | |
| All* | Total formula weight | 73229.4 |
