6NDY
Vps4 with Cyclic Peptide Bound in the Central Pore
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D, E | Vacuolar protein sorting-associated protein 4 | polymer | 337 | 37120.8 | 5 | UniProt (P52917) Pfam (PF00004) Pfam (PF17862) Pfam (PF09336) In PDB | Saccharomyces cerevisiae (Baker's yeast) | Vps4, DOA4-independent degradation protein 6, Protein END13, Vacuolar protein-targeting protein 10 |
| 2 | G | Designed Cyclic Peptide | polymer | 30 | 2660.0 | 1 | synthetic construct | ||
| 3 | A, B, C, D, E | ADENOSINE-5'-DIPHOSPHATE | non-polymer | 427.2 | 5 | Chemie (ADP) | |||
| 4 | A, B, C | BERYLLIUM TRIFLUORIDE ION | non-polymer | 66.0 | 3 | Chemie (BEF) | |||
| 5 | A, B, C, D | MAGNESIUM ION | non-polymer | 24.3 | 4 | Chemie (MG) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 188263.8 | |
| Non-Polymers* | Number of molecules | 12 |
| Total formula weight | 2431.2 | |
| All* | Total formula weight | 190695.0 |
