6NC3
AMC011 v4.2 SOSIP Env trimer in complex with fusion peptide targeting antibody VRC34 fragment antigen binding
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, E, I, M, Q... (A, C, D, E, F...) | HIV-1 Env AMC011 v4.2 SOSIP gp120 | polymer | 512 | 57668.9 | 6 | Human immunodeficiency virus 1 | ||
| 2 | B, F, J, N, R... (B, I, J, K, M...) | HIV-1 Env AMC011 v4.2 SOSIP gp41 | polymer | 153 | 17300.7 | 6 | Pfam (PF00517) UniProt (by SIFTS) (Q78156) | Human immunodeficiency virus 1 | |
| 3 | C, G, K, O, S... (H, O, P, Q, R...) | Monoclonal antibody VRC34.01 fragment antigen binding heavy chain | polymer | 222 | 23668.4 | 6 | Homo sapiens (human) | ||
| 4 | D, H, L, P, T... (L, T, U, V, W...) | Monoclonal antibody VRC34.01 fragment antigen binding light chain | polymer | 210 | 22880.5 | 6 | Homo sapiens (human) | ||
| 5 | AB, BA, DB, FA, HB... (0, b, 3, f, 7...) | alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 910.8 | 12 | In PDB GlyTouCan (G22768VO) | |||
| 6 | BB, CA, EB, GA, IB... (1, c, 4, g, 8...) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 12 | In PDB GlyTouCan (G42666HT) | |||
| 7 | AA, CB, HA, JB, OA... (a, 2, h, 9, o...) | alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 748.7 | 6 | In PDB GlyTouCan (G22573RC) | |||
| 8 | DA, EA, FB, GB, KA... (d, e, 5, 6, k...) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 12 | In PDB GlyTouCan (G15407YE) | |||
| 9 | AC, BC, CC, DC, EC... (F, G, A, C, D...) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 18 | Chemie (NAG) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 24 |
| Total formula weight | 729111.3 | |
| Branched | Number of molecules | 42 |
| Total formula weight | 27553.3 | |
| Non-Polymers* | Number of molecules | 18 |
| Total formula weight | 3981.7 | |
| All* | Total formula weight | 760646.3 |
