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6N9V

Structure of bacteriophage T7 lagging-strand DNA polymerase (D5A/E7A) and gp4 (helicase/primase) bound to DNA including RNA/DNA hybrid, and an incoming dTTP (LagS1)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D, E...DNA primase/helicasepolymer56662734.46UniProt (P03692)
Pfam (PF08273)
Pfam (PF21268)
Pfam (PF01751)
Pfam (PF03796)
In PDB
Enterobacteria phage T7Gene product 4,Gp4
2HDNA-directed DNA polymerasepolymer70479703.61UniProt (P00581)
Pfam (PF00476)
In PDB
Enterobacteria phage T7 (Bacteriophage T7)Gene product 5,Gp5
3PPrimerpolymer61842.21Enterobacteria phage T7
4TTemplatepolymer4413402.61Enterobacteria phage T7
5B, C, D, E, F...THYMIDINE-5'-TRIPHOSPHATEnon-polymer482.26Chemie (TTP)
6B, C, D, E, F...MAGNESIUM IONnon-polymer24.37Chemie (MG)
7EZINC IONnon-polymer65.41Chemie (ZN)
Sequence modifications
A, B, C, D, E, F: 1 - 566 (UniProt: P03692)
PDBExternal DatabaseDetails
Gln 343Glu 343engineered mutation
H: 1 - 704 (UniProt: P00581)
PDBExternal DatabaseDetails
Ala 5Asp 5engineered mutation
Ala 7Glu 7engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains9
Total formula weight471354.9
Non-Polymers*Number of molecules14
Total formula weight3128.6
All*Total formula weight474483.5
*Water molecules are not included.

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PDB entries from 2024-05-01

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