6N9T
Structure of a peptide-based photo-affinity cross-linker with Herceptin Fc
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C (A, B) | Immunoglobulin G1 FC | polymer | 224 | 25239.6 | 2 | UniProt (Q6MZV7) | Homo sapiens (Human) | |
| 2 | B, D (E, F) | Photo-affinity peptide | polymer | 13 | 1685.9 | 2 | synthetic construct | ||
| 3 | E (C) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1260.2 | 1 | In PDB GlyTouCan (G20449BJ) | |||
| 4 | F (D) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1260.2 | 1 | In PDB GlyTouCan (G45889JQ) | |||
| 5 | G, H, I, J (A, E, B, F) | water | water | 18.0 | 170 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 53850.9 | |
| Branched | Number of molecules | 2 |
| Total formula weight | 2520.3 | |
| All* | Total formula weight | 56371.3 |
