6N94
Methylmalonyl-CoA decarboxylase in complex with 2-nitronate-propionyl-amino(dethia)-CoA
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D, E... (A, B, C, D, E...) | Methylmalonyl-CoA decarboxylase | polymer | 261 | 29190.6 | 6 | UniProt (P52045) Pfam (PF00378) | Escherichia coli (strain K12) | MMCD,Transcarboxylase |
| 2 | G, I, K, L, Q... (A, B, C, D, E...) | [1-[2-[3-[[(2~{R})-4-[[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-4-oxidanyl-3-phosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxy-3,3-dimethyl-2-oxidanyl-butanoyl]amino]propanoylamino]ethylamino]-1-oxidanylidene-propan-2-ylidene]-bis(oxidanidyl)azanium | non-polymer | 850.5 | 9 | Chemie (KGJ) | |||
| 3 | H, P (A, D) | NICKEL (II) ION | non-polymer | 58.7 | 2 | Chemie (NI) | |||
| 4 | J, N (B, C) | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 2 | Chemie (PEG) | |||
| 5 | M, W (C, F) | POTASSIUM ION | non-polymer | 39.1 | 2 | Chemie (K) | |||
| 6 | O (C) | TETRAETHYLENE GLYCOL | non-polymer | 194.2 | 1 | Chemie (PG4) | |||
| 7 | R (D) | IMIDAZOLE | non-polymer | 69.1 | 1 | Chemie (IMD) | |||
| 8 | X (F) | TRIETHYLENE GLYCOL | non-polymer | 150.2 | 1 | Chemie (PGE) | |||
| 9 | AA, BA, CA, DA, Y... (C, D, E, F, A...) | water | water | 18.0 | 1835 | Chemie (HOH) |
Sequence modifications
A, B, C, D, E, F: 1 - 261 (UniProt: P52045)
| PDB | External Database | Details |
|---|---|---|
| Ala 2 | Ser 2 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 175143.3 | |
| Non-Polymers* | Number of molecules | 18 |
| Total formula weight | 8476.1 | |
| All* | Total formula weight | 183619.5 |
