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6MWI

Crystal structure of 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (IspF) Burkholderia pseudomallei in complex with ligand HGN-0456

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C
(A, B, C)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthasepolymer16617495.93UniProt (Q3JRA0)
Pfam (PF02542)
Burkholderia pseudomallei (strain 1710b)MECPS
2D, G, J
(A, B, C)
ZINC IONnon-polymer65.43Chemie (ZN)
3E, K
(A, C)
DIMETHYL SULFOXIDEnon-polymer78.12Chemie (DMS)
4F
(A)
ACETATE IONnon-polymer59.01Chemie (ACT)
5H
(B)
6-ethoxy-1,3-benzothiazole-2-sulfonamidenon-polymer258.31Chemie (EZL)
6I
(B)
DI(HYDROXYETHYL)ETHERnon-polymer106.11Chemie (PEG)
7L, M, N
(A, B, C)
waterwater18.0477Chemie (HOH)
Sequence modifications
A, B, C: 1 - 162 (UniProt: Q3JRA0)
PDBExternal DatabaseDetails
Gly -3-expression tag
Pro -2-expression tag
Gly -1-expression tag
Ser 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight52487.6
Non-Polymers*Number of molecules8
Total formula weight776.0
All*Total formula weight53263.6
*Water molecules are not included.

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PDB entries from 2025-06-18

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