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6MTD

Rabbit 80S ribosome with eEF2 and SERBP1 (unrotated state with 40S head swivel)

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1528S rRNApolymer35971167366.11Oryctolagus cuniculus (Rabbit)
275S rRNApolymer12038691.91GenBank (39)Oryctolagus cuniculus (Rabbit)
385.8S rRNApolymer15148559.71Oryctolagus cuniculus (Rabbit)
4AuL2polymer24826998.61UniProt (G1TT27)
Pfam (PF00181)
Pfam (PF03947)
In PDB
Oryctolagus cuniculus (Rabbit)
5BuL3polymer39445119.81UniProt (G1TL06)
Pfam (PF00297)
In PDB
Oryctolagus cuniculus (Rabbit)
6CuL4polymer36241114.41UniProt (G1SVW5)
Pfam (PF00573)
Pfam (PF14374)
In PDB
Oryctolagus cuniculus (Rabbit)
7DuL18polymer29334077.41UniProt (G1SYJ6)
Pfam (PF14204)
Pfam (PF17144)
In PDB
Oryctolagus cuniculus (Rabbit)
8EeL6polymer29133028.31UniProt (G1SKF7)
Pfam (PF03868)
Pfam (PF01159)
In PDB
Oryctolagus cuniculus (Rabbit)
9FuL30polymer22526658.81UniProt (G1SV32)
Pfam (PF08079)
Pfam (PF00327)
In PDB
Oryctolagus cuniculus (Rabbit)
10GeL8polymer31936221.51Oryctolagus cuniculus (Rabbit)
11HuL6polymer19021627.21UniProt (G1TX33)
Pfam (PF00347)
UniProt (by SIFTS) (G1SWI6)
In PDB
Oryctolagus cuniculus (Rabbit)
12IuL16polymer21424643.11UniProt (B7NZQ2)
Pfam (PF00252)
In PDB
Oryctolagus cuniculus (Rabbit)
13JuL5polymer17019399.51UniProt (G1TUB8)
Pfam (PF00281)
Pfam (PF00673)
In PDB
Oryctolagus cuniculus (Rabbit)
14LeL13polymer21024200.51Oryctolagus cuniculus (Rabbit)
15MeL14polymer13816217.41UniProt (U3KNW6)
Pfam (PF01929)
In PDB
Oryctolagus cuniculus (Rabbit)
16NeL15polymer20324076.11UniProt (G1T0C1)
Pfam (PF00827)
In PDB
Oryctolagus cuniculus (Rabbit)
17OuL13polymer19923144.91Oryctolagus cuniculus (Rabbit)
18PuL22polymer15317758.71UniProt (G1SCJ6)
Pfam (PF00237)
In PDB
Oryctolagus cuniculus (Rabbit)
19QeL18polymer18721568.51Oryctolagus cuniculus (Rabbit)
20ReL19polymer18021613.01UniProt (Q3T0W9)
Pfam (PF01280)
In PDB
Oryctolagus cuniculus (Rabbit)
21SeL20polymer17620827.61UniProt (A0A287APR1)
Pfam (PF01775)
In PDB
Oryctolagus cuniculus (Rabbit)
22TeL21polymer15918478.81UniProt (G1SHQ2)
Pfam (PF01157)
In PDB
Oryctolagus cuniculus (Rabbit)
23UeL22polymer9911495.31Oryctolagus cuniculus (Rabbit)
24VuL14polymer13113972.41UniProt (G1T6D1)
Pfam (PF00238)
In PDB
Oryctolagus cuniculus (Rabbit)
25WeL24polymer15717825.11UniProt (G1SE28)
Pfam (PF01246)
In PDB
Oryctolagus cuniculus (Rabbit)
26XuL23polymer11813727.21UniProt (Q24JY1)
Pfam (PF03939)
Pfam (PF00276)
In PDB
Oryctolagus cuniculus (Rabbit)
27YuL24polymer13415891.81UniProt (G1SQH0)
Pfam (PF16906)
Pfam (PF00467)
In PDB
Oryctolagus cuniculus (Rabbit)
28ZeL27polymer13515704.61UniProt (G1TXF6)
Pfam (PF00467)
Pfam (PF01777)
In PDB
Oryctolagus cuniculus (Rabbit)
29auL15polymer14716489.41UniProt (G1SNY0)
Pfam (PF00828)
In PDB
Oryctolagus cuniculus (Rabbit)
30beL29polymer24526708.71Oryctolagus cuniculus (Rabbit)
31ceL30polymer9810914.81UniProt (G1TDL2)
Pfam (PF01248)
In PDB
Oryctolagus cuniculus (Rabbit)
32deL31polymer10712635.71UniProt (G1SHG0)
Pfam (PF01198)
In PDB
Oryctolagus cuniculus (Rabbit)
33eeL32polymer12815022.01UniProt (G1U437)
Pfam (PF01655)
UniProt (by SIFTS) (G1TUN8)
In PDB
Oryctolagus cuniculus (Rabbit)
34feL33polymer10912449.61UniProt (G1SF08)
Pfam (PF01247)
In PDB
Oryctolagus cuniculus (Rabbit)
35geL34polymer11412994.61UniProt (P49207)
Pfam (PF01199)
In PDB
Oryctolagus cuniculus (Rabbit)Large ribosomal subunit protein eL34
36huL29polymer12214435.41UniProt (G1SIT5)
Pfam (PF00831)
In PDB
Oryctolagus cuniculus (Rabbit)
37ieL36polymer10211888.41UniProt (G1TTQ5)
Pfam (PF01158)
In PDB
Oryctolagus cuniculus (Rabbit)
38jeL37polymer8610090.91UniProt (U3KPD5)
Pfam (PF01907)
In PDB
Oryctolagus cuniculus (Rabbit)
39keL38polymer698107.81UniProt (Q32PB9)
Pfam (PF01781)
In PDB
Oryctolagus cuniculus (Rabbit)
40leL39polymer506324.61UniProt (G1TTN1)
Pfam (PF00832)
In PDB
Oryctolagus cuniculus (Rabbit)
41meL40polymer526212.61Oryctolagus cuniculus (Rabbit)
42neL41polymer253473.51Oryctolagus cuniculus (Rabbit)
43oeL42polymer10312070.51UniProt (G1T040)
Pfam (PF00935)
In PDB
Oryctolagus cuniculus (Rabbit)
44peL43polymer9110168.21UniProt (G1SY53)
Pfam (PF01780)
In PDB
Oryctolagus cuniculus (Rabbit)
45rel28polymer12414220.71UniProt (G1U7L1)
Pfam (PF01778)
In PDB
Oryctolagus cuniculus (Rabbit)
46suL10polymer19621521.11UniProt (Q29214)
Pfam (PF00466)
Pfam (PF17777)
In PDB
Oryctolagus cuniculus (Rabbit)60S ribosomal protein L10E
47teL11polymer15316561.11UniProt (G1SMR7)
Pfam (PF03946)
Pfam (PF00298)
In PDB
Oryctolagus cuniculus (Rabbit)
48uuL1polymer20623599.91UniProt (G1SKZ8)
Pfam (PF00687)
In PDB
Oryctolagus cuniculus (Rabbit)
49veEF2polymer83993391.01Oryctolagus cuniculus (Rabbit)EF-2
50wSERBP1polymer263083.31Oryctolagus cuniculus (Rabbit)
51918S rRNApolymer1698548241.41Oryctolagus cuniculus (Rabbit)
52AAuS2polymer21724361.91Oryctolagus cuniculus (Rabbit)
53BBeS1polymer21324759.11UniProt (G1SS70)
Pfam (PF01015)
In PDB
Oryctolagus cuniculus (Rabbit)
54CCuS5polymer22124441.81UniProt (O18789)
Pfam (PF00333)
Pfam (PF03719)
In PDB
Oryctolagus cuniculus (Rabbit)
55DDuS3polymer22825215.61UniProt (E2RH47)
Pfam (PF07650)
Pfam (PF00189)
In PDB
Oryctolagus cuniculus (Rabbit)
56EEeS4polymer26229523.71UniProt (Q76N24)
Pfam (PF08071)
Pfam (PF00900)
Pfam (PF00467)
Pfam (PF16121)
In PDB
Oryctolagus cuniculus (Rabbit)
57FFuS7polymer20422913.51UniProt (G1TFM5)
Pfam (PF00177)
In PDB
Oryctolagus cuniculus (Rabbit)
58GGeS6polymer23727471.51UniProt (G1TM55)
Pfam (PF01092)
In PDB
Oryctolagus cuniculus (Rabbit)
59HHeS7polymer19422168.91UniProt (G1SVB0)
Pfam (PF01251)
In PDB
Oryctolagus cuniculus (Rabbit)
60IIeS8polymer20624003.01UniProt (Q5E958)
Pfam (PF01201)
In PDB
Oryctolagus cuniculus (Rabbit)
61JJuS4polymer18521649.61UniProt (B7NZS8)
Pfam (PF00163)
Pfam (PF01479)
In PDB
Oryctolagus cuniculus (Rabbit)
62KKeS10polymer9611529.71UniProt (G1TPV3)
Pfam (PF03501)
In PDB
Oryctolagus cuniculus (Rabbit)
63LLuS17polymer15818468.81UniProt (G1TRM4)
Pfam (PF16205)
Pfam (PF00366)
In PDB
Oryctolagus cuniculus (Rabbit)
64MMeS12polymer11713048.21UniProt (G1SFR8)
Pfam (PF01248)
In PDB
Oryctolagus cuniculus (Rabbit)
65NNuS15polymer14917057.11UniProt (G1SP51)
Pfam (PF08069)
Pfam (PF00312)
In PDB
Oryctolagus cuniculus (Rabbit)
66OOuS11polymer13614544.71UniProt (P13471)
Pfam (PF00411)
In PDB
Oryctolagus cuniculus (Rabbit)
67PPuS19polymer12014246.91UniProt (G1U0Q2)
Pfam (PF00203)
In PDB
Oryctolagus cuniculus (Rabbit)
68QQuS9polymer14216032.81UniProt (Q3T0X6)
Pfam (PF00380)
In PDB
Oryctolagus cuniculus (Rabbit)
69RReS17polymer13215250.71UniProt (G1TU13)
Pfam (PF00833)
In PDB
Oryctolagus cuniculus (Rabbit)
70SSuS13polymer14416898.61UniProt (G1TPG3)
Pfam (PF00416)
In PDB
Oryctolagus cuniculus (Rabbit)
71TTeS19polymer14115611.01Oryctolagus cuniculus (Rabbit)
72UUuS10polymer10011395.51UniProt (Q3ZBH8)
Pfam (PF00338)
In PDB
Oryctolagus cuniculus (Rabbit)
73VVeS21polymer839124.41UniProt (Q32PB8)
Pfam (PF01249)
In PDB
Oryctolagus cuniculus (Rabbit)
74WWuS8polymer12914734.41UniProt (G1TG89)
Pfam (PF00410)
In PDB
Oryctolagus cuniculus (Rabbit)
75XXuS12polymer14115626.41UniProt (Q3T199)
Pfam (PF00164)
In PDB
Oryctolagus cuniculus (Rabbit)
76YYeS24polymer12414432.11UniProt (P62847)
Pfam (PF01282)
In PDB
Oryctolagus cuniculus (Rabbit)Small ribosomal subunit protein eS24
77ZZeS25polymer758526.11UniProt (G1TDB3)
Pfam (PF03297)
In PDB
Oryctolagus cuniculus (Rabbit)
78aaeS26polymer10111645.81UniProt (Q56JV1)
Pfam (PF01283)
In PDB
Oryctolagus cuniculus (Rabbit)
79bbeS27polymer839349.01UniProt (Q2KHT7)
Pfam (PF01667)
In PDB
Oryctolagus cuniculus (Rabbit)
80cceS28polymer627007.11UniProt (G1TIB4)
Pfam (PF01200)
In PDB
Oryctolagus cuniculus (Rabbit)
81dduS14polymer556559.61UniProt (G1U7M4)
Pfam (PF00253)
In PDB
Oryctolagus cuniculus (Rabbit)
82eeeS30polymer556317.51UniProt (G1T8A2)
Pfam (PF04758)
In PDB
Oryctolagus cuniculus (Rabbit)
83ffeS31polymer687986.41UniProt (G1SK22)
Pfam (PF01599)
In PDB
Oryctolagus cuniculus (Rabbit)
84ggRACK1polymer31334669.11UniProt (G1SJB4)
Pfam (PF00400)
In PDB
Oryctolagus cuniculus (Rabbit)
855, 7, 9, 8, A...MAGNESIUM IONnon-polymer24.3297Chemie (MG)
86g, j, m, o, p...ZINC IONnon-polymer65.48Chemie (ZN)
87vGUANOSINE-5'-DIPHOSPHATEnon-polymer443.21Chemie (GDP)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains84
Total formula weight3307183.8
Non-Polymers*Number of molecules306
Total formula weight8185.1
All*Total formula weight3315368.8
*Water molecules are not included.

218853

PDB entries from 2024-04-24

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