6MP1
Crystal structures of the murine class I major histocompatibility complex H-2Db in complex with the mutant TRP1-K8 peptide
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A | TRP1-K8 peptide, Beta-2-microglobulin,H-2 class I histocompatibility antigen, D-B alpha chain, chimeric construct | polymer | 447 | 50019.4 | 1 | UniProt (P07147) UniProt (P01887) UniProt (P01899) Pfam (PF07654) Pfam (PF00129) In PDB | Mus musculus (Mouse) | DHICA oxidase,Brown locus protein,Catalase B,Tyrosinase-related protein 1,TRP1,H-2D(B) |
| 2 | A | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 2 | Chemie (NAG) | |||
| 3 | water | water | 18.0 | 58 | Chemie (HOH) |
Sequence modifications
A: 1 - 9 (UniProt: P07147)
A: 1001 - 1980 (UniProt: P01887)
A: 2001 - 2276 (UniProt: P01899)
| PDB | External Database | Details |
|---|---|---|
| Lys 8 | Tyr 462 | engineered mutation |
| Met 9 | Ala 463 | engineered mutation |
| Gly 10 | - | linker |
| Gly 987 | - | linker |
| Gly 988 | - | linker |
| Gly 989 | - | linker |
| Ser 990 | - | linker |
| Gly 991 | - | linker |
| Gly 992 | - | linker |
| Gly 993 | - | linker |
| Gly 994 | - | linker |
| Ser 995 | - | linker |
| Gly 996 | - | linker |
| Gly 997 | - | linker |
| Gly 998 | - | linker |
| Gly 999 | - | linker |
| Ser 1000 | - | linker |
| PDB | External Database | Details |
|---|---|---|
| Gly 1981 | - | linker |
| Gly 1982 | - | linker |
| Gly 1983 | - | linker |
| Gly 1984 | - | linker |
| Ser 1985 | - | linker |
| Gly 1986 | - | linker |
| Gly 1987 | - | linker |
| Gly 1988 | - | linker |
| Gly 1989 | - | linker |
| Ser 1990 | - | linker |
| Gly 1991 | - | linker |
| Gly 1992 | - | linker |
| Gly 1993 | - | linker |
| Gly 1994 | - | linker |
| Ser 1995 | - | linker |
| Gly 1996 | - | linker |
| Gly 1997 | - | linker |
| Gly 1998 | - | linker |
| Gly 1999 | - | linker |
| Ser 2000 | - | linker |
| PDB | External Database | Details |
|---|---|---|
| Ala 2084 | Tyr 108 | engineered mutation |
| Ala 2277 | - | expression tag |
| Ala 2278 | - | expression tag |
| Ala 2279 | - | expression tag |
| Gly 2280 | - | expression tag |
| Gly 2281 | - | expression tag |
| Gly 2282 | - | expression tag |
| Leu 2283 | - | expression tag |
| Asn 2284 | - | expression tag |
| Asp 2285 | - | expression tag |
| Ile 2286 | - | expression tag |
| Phe 2287 | - | expression tag |
| Glu 2288 | - | expression tag |
| Ala 2289 | - | expression tag |
| Gln 2290 | - | expression tag |
| Lys 2291 | - | expression tag |
| Ile 2292 | - | expression tag |
| Glu 2293 | - | expression tag |
| Trp 2294 | - | expression tag |
| His 2295 | - | expression tag |
| Glu 2296 | - | expression tag |
| His 2297 | - | expression tag |
| His 2298 | - | expression tag |
| His 2299 | - | expression tag |
| His 2300 | - | expression tag |
| His 2301 | - | expression tag |
| His 2302 | - | expression tag |
| His 2303 | - | expression tag |
| His 2304 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 50019.4 | |
| Non-Polymers* | Number of molecules | 2 |
| Total formula weight | 442.4 | |
| All* | Total formula weight | 50461.8 |
