6MP0
Crystal structures of the murine class I major histocompatibility complex H-2Db in complex with the TRP1-M9 peptide
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | TRP1-M9 peptide, Beta-2-microglobulin,H-2 class I histocompatibility antigen, D-B alpha chain, chimeric construct | polymer | 447 | 50053.4 | 1 | UniProt (P07147) UniProt (P01887) UniProt (P01899) Pfam (PF07654) Pfam (PF00129) In PDB | Mus musculus (Mouse) | DHICA oxidase,Brown locus protein,Catalase B,Tyrosinase-related protein 1,TRP1,H-2D(B) |
2 | A | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 2 | Chemie (NAG) | |||
3 | water | water | 18.0 | 381 | Chemie (HOH) |
Sequence modifications
A: 1 - 9 (UniProt: P07147)
A: 1001 - 1099 (UniProt: P01887)
A: 2001 - 2276 (UniProt: P01899)
PDB | External Database | Details |
---|---|---|
Met 9 | Ala 463 | engineered mutation |
Gly 10 | - | linker |
Gly 11 | - | linker |
Gly 12 | - | linker |
Gly 989 | - | linker |
Ser 990 | - | linker |
Gly 991 | - | linker |
Gly 992 | - | linker |
Gly 993 | - | linker |
Gly 994 | - | linker |
Ser 995 | - | linker |
Gly 996 | - | linker |
Gly 997 | - | linker |
Gly 998 | - | linker |
Gly 999 | - | linker |
Ser 1000 | - | linker |
PDB | External Database | Details |
---|---|---|
Gly 1981 | - | linker |
Gly 1982 | - | linker |
Gly 1983 | - | linker |
Gly 1984 | - | linker |
Ser 1985 | - | linker |
Gly 1986 | - | linker |
Gly 1987 | - | linker |
Gly 1988 | - | linker |
Gly 1989 | - | linker |
Ser 1990 | - | linker |
Gly 1991 | - | linker |
Gly 1992 | - | linker |
Gly 1993 | - | linker |
Gly 1994 | - | linker |
Ser 1995 | - | linker |
Gly 1996 | - | linker |
Gly 1997 | - | linker |
Gly 1998 | - | linker |
Gly 1999 | - | linker |
Ser 2000 | - | linker |
PDB | External Database | Details |
---|---|---|
Ala 2084 | Tyr 108 | engineered mutation |
Ala 2277 | - | expression tag |
Ala 2278 | - | expression tag |
Ala 2279 | - | expression tag |
Gly 2280 | - | expression tag |
Gly 2281 | - | expression tag |
Gly 2282 | - | expression tag |
Leu 2283 | - | expression tag |
Asn 2284 | - | expression tag |
Asp 2285 | - | expression tag |
Ile 2286 | - | expression tag |
Phe 2287 | - | expression tag |
Glu 2288 | - | expression tag |
Ala 2289 | - | expression tag |
Gln 2290 | - | expression tag |
Lys 2291 | - | expression tag |
Ile 2292 | - | expression tag |
Glu 2293 | - | expression tag |
Trp 2294 | - | expression tag |
His 2295 | - | expression tag |
Glu 2296 | - | expression tag |
His 2297 | - | expression tag |
His 2298 | - | expression tag |
His 2299 | - | expression tag |
His 2300 | - | expression tag |
His 2301 | - | expression tag |
His 2302 | - | expression tag |
His 2303 | - | expression tag |
His 2304 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 1 |
Total formula weight | 50053.4 | |
Non-Polymers* | Number of molecules | 2 |
Total formula weight | 442.4 | |
All* | Total formula weight | 50495.8 |