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6ME6

XFEL crystal structure of human melatonin receptor MT2 in complex with 2-phenylmelatonin

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Soluble cytochrome b562,Melatonin receptor type 1B,Rubredoxinpolymer46051514.62UniProt (P0ABE7)
UniProt (P49286)
UniProt (P00268)
Pfam (PF07361)
Pfam (PF00001)
Pfam (PF00301)
Escherichia coliCytochrome b-562,Mel1b receptor,Rd,Mel1b receptor
2C, E
(A, B)
N-[2-(5-methoxy-2-phenyl-1H-indol-3-yl)ethyl]acetamidenon-polymer308.42Chemie (JEY)
3D
(A)
ZINC IONnon-polymer65.41Chemie (ZN)
4F
(B)
(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoatenon-polymer356.51Chemie (OLC)
Sequence modifications
A, B: 2001 - 2106 (UniProt: P0ABE7)
PDBExternal DatabaseDetails
Trp 2007Met 29engineered mutation
Ile 2102His 124engineered mutation
Leu 2106Arg 128engineered mutation
Gly 31-linker
Asp 32-linker
Gly 33-linker
Ala 34-linker
A, B: 35 - 231 (UniProt: P49286)
PDBExternal DatabaseDetails
Ser 37Pro 37engineered mutation
Asn 86Asp 86engineered mutation
Phe 108Leu 108engineered mutation
Trp 129Phe 129engineered mutation
Asp 137Asn 137engineered mutation
Leu 140Cys 140engineered mutation
A, B: 1000 - 1052 (UniProt: P00268)
A, B: 241 - 340 (UniProt: P49286)
PDBExternal DatabaseDetails
Phe 264Trp 264engineered mutation
Pro 305Ala 305engineered mutation
Asp 312Asn 312engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight103029.2
Non-Polymers*Number of molecules4
Total formula weight1038.7
All*Total formula weight104067.9
*Water molecules are not included.

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PDB entries from 2025-06-11

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