6M5V
The coordinate of the hexameric terminase complex in the presence of the ADP-BeF3
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A | Tripartite terminase subunit 3 | polymer | 690 | 76064.7 | 1 | UniProt (P04295) Pfam (PF02500) Pfam (PF02499) In PDB | Human alphaherpesvirus 1 strain 17 (HHV-1) | Terminase large subunit |
| 2 | B | Tripartite terminase subunit 1 | polymer | 771 | 84187.4 | 1 | UniProt (P10212) Pfam (PF01366) In PDB | Human alphaherpesvirus 1 strain 17 (HHV-1) | |
| 3 | C | Tripartite terminase subunit 2 | polymer | 117 | 13081.8 | 1 | UniProt (B9VQG1) Pfam (PF03581) UniProt (by SIFTS) (P10217) In PDB | Human alphaherpesvirus 1 strain 17 (HHV-1) | |
| 4 | A | ADENOSINE-5'-DIPHOSPHATE | non-polymer | 427.2 | 1 | Chemie (ADP) | |||
| 5 | A | BERYLLIUM TRIFLUORIDE ION | non-polymer | 66.0 | 1 | Chemie (BEF) | |||
| 6 | A | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) | |||
| 7 | B | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) |
Sequence modifications
B: 2 - 772 (UniProt: P10212)
| PDB | External Database | Details |
|---|---|---|
| Ser 216 | Arg 216 | engineered mutation |
| Gln 312 | Arg 312 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 173333.9 | |
| Non-Polymers* | Number of molecules | 5 |
| Total formula weight | 648.3 | |
| All* | Total formula weight | 173982.2 |
