6LS9

Crystal structure of bovine herpesvirus 1 glycoprotein D

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A, B, C (A, B, C)	Envelope glycoprotein D	polymer	311	34871.6	3	UniProt (Q76PF1) Pfam (PF01537)	Bovine alphaherpesvirus 1	Glycoprotein D
2	D (D)	2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose	branched		627.6	1	In PDB BIRD (PRD_900017) GlyTouCan (G47362BJ)		triacetyl-beta-chitotriose
3	E, F, G (A, B, C)	2-acetamido-2-deoxy-beta-D-glucopyranose	non-polymer		221.2	3	Chemie (NAG)
4	H, I, J (A, B, C)	water	water		18.0	69	Chemie (HOH)

Sequence modifications

A, B, C: 1 - 301 (UniProt: Q76PF1)

PDB	External Database	Details
Ala -3	-	expression tag
Asp -2	-	expression tag
Glu -1	-	expression tag
Phe 0	-	expression tag
His 302	-	expression tag
His 303	-	expression tag
His 304	-	expression tag
His 305	-	expression tag
His 306	-	expression tag
His 307	-	expression tag

Contents of the asymmetric unit

Polymers	Number of chains	3
	Total formula weight	104614.9
Branched	Number of molecules	1
	Total formula weight	627.6
Non-Polymers*	Number of molecules	3
	Total formula weight	663.6
All*	Total formula weight	105906.1

*Water molecules are not included.