6LJL
Crystal Structure of exoHep-Y390A/H555A complexed with a tetrasaccharide substrate
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A (A) | Heparinase II/III-like protein | polymer | 876 | 99898.3 | 1 | UniProt (B3C5J6) Pfam (PF16332) Pfam (PF07940) | Bacteroides intestinalis DSM 17393 | |
2 | B (B) | 4-deoxy-alpha-L-threo-hex-4-enopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose | branched | 1074.9 | 1 | In PDB GlyTouCan (G59698OW) | |||
3 | C, D (A) | CALCIUM ION | non-polymer | 40.1 | 2 | Chemie (CA) | |||
4 | E (A) | water | water | 18.0 | 852 | Chemie (HOH) |
Sequence modifications
A: 1 - 868 (UniProt: B3C5J6)
PDB | External Database | Details |
---|---|---|
Ala 390 | Tyr 390 | engineered mutation |
Ala 555 | His 555 | engineered mutation |
Leu 869 | - | expression tag |
Glu 870 | - | expression tag |
His 871 | - | expression tag |
His 872 | - | expression tag |
His 873 | - | expression tag |
His 874 | - | expression tag |
His 875 | - | expression tag |
His 876 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 1 |
Total formula weight | 99898.3 | |
Branched | Number of molecules | 1 |
Total formula weight | 1074.9 | |
Non-Polymers* | Number of molecules | 2 |
Total formula weight | 80.2 | |
All* | Total formula weight | 101053.3 |