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6L25

Deoxyribonuclease from Staphylococcus aureus

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Deoxyribonuclease YcfHpolymer27331410.62UniProt (W8U6D8)
Pfam (PF01026)
Staphylococcus aureusHydrolase TatD,Hydrolase,TatD family,Metal-dependent DNase,Mg-dependent DNase,Putative deoxyribonuclease YcfH,TatD family deoxyribonuclease
2C, D, G, H
(A, B)
NICKEL (II) IONnon-polymer58.74Chemie (NI)
3E, F, I, J
(A, B)
PHOSPHATE IONnon-polymer95.04Chemie (PO4)
4K, L
(A, B)
waterwater18.0171Chemie (HOH)
Sequence modifications
A, B: 2 - 257 (UniProt: W8U6D8)
PDBExternal DatabaseDetails
His -15-expression tag
His -14-expression tag
His -13-expression tag
His -12-expression tag
His -11-expression tag
His -10-expression tag
Ser -9-expression tag
Ser -8-expression tag
Gly -7-expression tag
Leu -6-expression tag
Val -5-expression tag
Pro -4-expression tag
Arg -3-expression tag
Gly -2-expression tag
Ser -1-expression tag
His 0-expression tag
Mse 1-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight62821.2
Non-Polymers*Number of molecules8
Total formula weight614.7
All*Total formula weight63435.9
*Water molecules are not included.

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PDB entries from 2025-08-06

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