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6KBZ

Crystal structure of yedK with ssDNA containing a tetrahydrofuran abasic site

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, C, E, G
(B, D, F, H)
SOS response-associated proteinpolymer22725606.94UniProt (A0A2S5ZH06)
Pfam (PF02586)
UniProt (by SIFTS) (P76318)
Escherichia coliE.coli yedK
2B, D, F, H
(A, C, E, G)
5'-D (*CP*GP*GP*TP* (3DR) P*GP*AP*TP*TP*C)-3'polymer102926.94Escherichia colissDNA_THF
3I, J, K, L
(B, F, H)
MAGNESIUM IONnon-polymer24.34Chemie (MG)
4M, N, O, P, Q...
(B, A, D, C, F...)
waterwater18.01086Chemie (HOH)
Sequence modifications
B, D, F, H: 2 - 222 (UniProt: A0A2S5ZH06)
PDBExternal DatabaseDetails
Leu 223-expression tag
Glu 224-expression tag
Val 225-expression tag
Leu 226-expression tag
Phe 227-expression tag
Gln 228-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains8
Total formula weight114135.2
Non-Polymers*Number of molecules4
Total formula weight97.2
All*Total formula weight114232.4
*Water molecules are not included.

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PDB entries from 2025-07-23

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