6KAF

C2S2M2N2-type PSII-LHCII

This is a non-PDB format compatible entry.

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	r, R	Chlorophyll a-b binding protein CP29	polymer	280	29970.8	2	UniProt (Q93WD2) Pfam (PF00504) In PDB	Chlamydomonas reinhardtii	Lhcbm4
2	a, A	Photosystem II protein D1	polymer	352	39066.3	2	UniProt (P07753) Pfam (PF00124) In PDB	Chlamydomonas reinhardtii	PSII D1 protein,32 kDa thylakoid membrane protein,Photosystem II Q(B) protein
3	d, D	Photosystem II D2 protein	polymer	352	39474.0	2	UniProt (P06007) Pfam (PF00124) In PDB	Chlamydomonas reinhardtii	PSII D2 protein,Photosystem Q(A) protein
4	f, F	Cytochrome b559 subunit beta	polymer	44	4986.0	2	UniProt (Q08363) Pfam (PF00283) In PDB	Chlamydomonas reinhardtii	PSII reaction center subunit VI
5	h, H	Photosystem II reaction center protein H	polymer	88	9445.1	2	UniProt (P22666) Pfam (PF00737) In PDB	Chlamydomonas reinhardtii	PSII-H,Photosystem II 8 kDa phosphoprotein
6	i, I	Photosystem II reaction center protein I	polymer	37	4245.0	2	UniProt (P59763) Pfam (PF02532) In PDB	Chlamydomonas reinhardtii	PSII-I,PSII 4.8 kDa protein
7	j, J	Photosystem II reaction center protein J, PsbJ	polymer	50	5725.7	2		Chlamydomonas reinhardtii
8	k, K	Photosystem II reaction center protein K	polymer	46	5062.1	2	UniProt (P18263) Pfam (PF02533) In PDB	Chlamydomonas reinhardtii	PSII-K
9	l, L	Photosystem II reaction center protein L	polymer	38	4431.2	2	UniProt (P32974) Pfam (PF02419) In PDB	Chlamydomonas reinhardtii	PSII-L
10	m, M	Photosystem II reaction center protein M	polymer	34	3762.4	2	UniProt (P92277) Pfam (PF05151) In PDB	Chlamydomonas reinhardtii	PSII-M
11	o, O	Oxygen-evolving enhancer protein 1 of photosystem II	polymer	291	30614.7	2	UniProt (A8J0E4) Pfam (PF01716) In PDB	Chlamydomonas reinhardtii
12	t, T	Photosystem II reaction center protein T	polymer	31	3639.4	2	UniProt (P37256) Pfam (PF01405) In PDB	Chlamydomonas reinhardtii	PSII-T
13	w, W	Photosystem II reaction center W protein, chloroplastic	polymer	115	12155.1	2	UniProt (Q9SPI9) Pfam (PF07123) In PDB	Chlamydomonas reinhardtii	PSII 6.1 kDa protein
14	x, X	4.1 kDa photosystem II subunit	polymer	101	9894.7	2	UniProt (A8I846) Pfam (PF06596) In PDB	Chlamydomonas reinhardtii
15	z, Z	Photosystem II reaction center protein Z	polymer	62	6565.9	2	UniProt (P92276) Pfam (PF01737) In PDB	Chlamydomonas reinhardtii	PSII-Z
16	Y, y	Photosystem II reaction center protein 30, Psb30	polymer	33	3333.1	2		Chlamydomonas reinhardtii
17	E, e	Cytochrome b559 subunit alpha	polymer	82	9312.6	2	UniProt (P48268) Pfam (PF00283) Pfam (PF00284) In PDB	Chlamydomonas reinhardtii	PSII reaction center subunit V
18	1, 2, 3, 4, 5...	Chlorophyll a-b binding protein, chloroplastic	polymer	257	27405.0	18	UniProt (Q93WL4) Pfam (PF00504) In PDB	Chlamydomonas reinhardtii
19	S, s	Chlorophyll a-b binding protein, chloroplastic	polymer	289	30742.8	2	UniProt (Q9FEK6) Pfam (PF00504) In PDB	Chlamydomonas reinhardtii
20	C, c	Photosystem II CP43 reaction center protein	polymer	461	50680.7	2	UniProt (P10898) Pfam (PF00421) In PDB	Chlamydomonas reinhardtii	PSII 43 kDa protein,Protein CP-43,Protein P6
21	B, b	Photosystem II CP47 reaction center protein	polymer	508	56159.8	2	UniProt (P37255) Pfam (PF00421) In PDB	Chlamydomonas reinhardtii	PSII 47 kDa protein,Protein CP-47
22	2, 5, p, P, N...	CHLOROPHYLL A	non-polymer		893.5	252	Chemie (CLA)
23	2, 5, s, p, P...	(3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL	non-polymer		568.9	30	Chemie (LUT)
24	G, 2, 5, g, p...	(3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL	non-polymer		600.9	20	Chemie (XAT)
25	Q, G, 2, 5, g...	1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE	non-polymer		723.0	40	Chemie (LHG)
26	3, 6, q, R, Q...	CHLOROPHYLL B	non-polymer		907.5	122	Chemie (CHL)
27	u, 2, 5, R, s...	(1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL	non-polymer		600.9	16	Chemie (NEX)
28	A, a	FE (II) ION	non-polymer		55.8	2	Chemie (FE2)
29	a, A	CHLORIDE ION	non-polymer		35.5	4	Chemie (CL)
30	a, A, d, D	PHEOPHYTIN A	non-polymer		871.2	4	Chemie (PHO)
31	t, x, z, a, C...	BETA-CAROTENE	non-polymer		536.9	22	Chemie (BCR)
32	a, A, C, L, l...	1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL	non-polymer		795.1	8	Chemie (SQD)
33	a, A, d, D	2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE	non-polymer		749.2	4	Chemie (PL9)
34	W, w, a, B, C...	1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE	non-polymer		787.2	14	Chemie (LMG)
35	a, D	BICARBONATE ION	non-polymer		61.0	2	Chemie (BCT)
36	C, a, c, B, A...	DIGALACTOSYL DIACYL GLYCEROL (DGDG)	non-polymer		949.3	10	Chemie (DGD)
37	E, e	PROTOPORPHYRIN IX CONTAINING FE	non-polymer		616.5	2	Chemie (HEM)

Contents of the asymmetric unit

Polymers	Number of chains	58
	Total formula weight	1211825.6
Non-Polymers*	Number of molecules	552
	Total formula weight	450262.5
All*	Total formula weight	1662088.1

*Water molecules are not included.