6KAF

C2S2M2N2-type PSII-LHCII

This is a non-PDB format compatible entry.

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A, VA (r, R)	Chlorophyll a-b binding protein CP29	polymer	280	29970.8	2	UniProt (Q93WD2) Pfam (PF00504)	Chlamydomonas reinhardtii	Lhcbm4
2	B, Q (a, A)	Photosystem II protein D1	polymer	352	39066.3	2	UniProt (P07753) Pfam (PF00124)	Chlamydomonas reinhardtii	PSII D1 protein,32 kDa thylakoid membrane protein,Photosystem II Q(B) protein
3	AB, C (d, D)	Photosystem II D2 protein	polymer	352	39474.0	2	UniProt (P06007) Pfam (PF00124)	Chlamydomonas reinhardtii	PSII D2 protein,Photosystem Q(A) protein
4	D, S (f, F)	Cytochrome b559 subunit beta	polymer	44	4986.0	2	UniProt (Q08363) Pfam (PF00283)	Chlamydomonas reinhardtii	PSII reaction center subunit VI
5	E, T (h, H)	Photosystem II reaction center protein H	polymer	88	9445.1	2	UniProt (P22666) Pfam (PF00737)	Chlamydomonas reinhardtii	PSII-H,Photosystem II 8 kDa phosphoprotein
6	F, U (i, I)	Photosystem II reaction center protein I	polymer	37	4245.0	2	UniProt (P59763) Pfam (PF02532)	Chlamydomonas reinhardtii	PSII-I,PSII 4.8 kDa protein
7	G, V (j, J)	Photosystem II reaction center protein J, PsbJ	polymer	50	5725.7	2		Chlamydomonas reinhardtii
8	H, W (k, K)	Photosystem II reaction center protein K	polymer	46	5062.1	2	UniProt (P18263) Pfam (PF02533)	Chlamydomonas reinhardtii	PSII-K
9	I, X (l, L)	Photosystem II reaction center protein L	polymer	38	4431.2	2	UniProt (P32974) Pfam (PF02419)	Chlamydomonas reinhardtii	PSII-L
10	J, Y (m, M)	Photosystem II reaction center protein M	polymer	34	3762.4	2	UniProt (P92277) Pfam (PF05151)	Chlamydomonas reinhardtii	PSII-M
11	K, ZA (o, O)	Oxygen-evolving enhancer protein 1 of photosystem II	polymer	291	30614.7	2	UniProt (A8J0E4) Pfam (PF01716)	Chlamydomonas reinhardtii
12	L, Z (t, T)	Photosystem II reaction center protein T	polymer	31	3639.4	2	UniProt (P37256) Pfam (PF01405)	Chlamydomonas reinhardtii	PSII-T
13	AA, M (w, W)	Photosystem II reaction center W protein, chloroplastic	polymer	115	12155.1	2	UniProt (Q9SPI9) Pfam (PF07123)	Chlamydomonas reinhardtii	PSII 6.1 kDa protein
14	BB, N (x, X)	4.1 kDa photosystem II subunit	polymer	101	9894.7	2	UniProt (A8I846) Pfam (PF06596)	Chlamydomonas reinhardtii
15	BA, O (z, Z)	Photosystem II reaction center protein Z	polymer	62	6565.9	2	UniProt (P92276) Pfam (PF01737)	Chlamydomonas reinhardtii	PSII-Z
16	CA, P (Y, y)	Photosystem II reaction center protein 30, Psb30	polymer	33	3333.1	2		Chlamydomonas reinhardtii
17	DB, R (E, e)	Cytochrome b559 subunit alpha	polymer	82	9312.6	2	UniProt (P48268) Pfam (PF00283) Pfam (PF00284)	Chlamydomonas reinhardtii	PSII reaction center subunit V
18	DA, EA, FA, GA, HA... (1, 2, 3, 4, 5...)	Chlorophyll a-b binding protein, chloroplastic	polymer	257	27405.0	18	UniProt (Q93WL4) Pfam (PF00504)	Chlamydomonas reinhardtii
19	FB, WA (S, s)	Chlorophyll a-b binding protein, chloroplastic	polymer	289	30742.8	2	UniProt (Q9FEK6) Pfam (PF00504)	Chlamydomonas reinhardtii
20	EB, XA (C, c)	Photosystem II CP43 reaction center protein	polymer	461	50680.7	2	UniProt (P10898) Pfam (PF00421)	Chlamydomonas reinhardtii	PSII 43 kDa protein,Protein CP-43,Protein P6
21	CB, YA (B, b)	Photosystem II CP47 reaction center protein	polymer	508	56159.8	2	UniProt (P37255) Pfam (PF00421)	Chlamydomonas reinhardtii	PSII 47 kDa protein,Protein CP-47
22	AF, AH, AJ, AL, AN... (2, 5, p, P, N...)	CHLOROPHYLL A	non-polymer		893.5	252	Chemie (CLA)
23	BF, BH, CF, CH, EW... (2, 5, s, p, P...)	(3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL	non-polymer		568.9	30	Chemie (LUT)
24	AO, DF, DH, DQ, HJ... (G, 2, 5, g, p...)	(3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL	non-polymer		600.9	20	Chemie (XAT)
25	AM, BO, EF, EH, EQ... (Q, G, 2, 5, g...)	1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE	non-polymer		723.0	40	Chemie (LHG)
26	AG, AI, AK, AR, BG... (3, 6, q, R, Q...)	CHLOROPHYLL B	non-polymer		907.5	122	Chemie (CHL)
27	AP, BP, LF, LH, LQ... (u, 2, 5, R, s...)	(1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL	non-polymer		600.9	16	Chemie (NEX)
28	FD, ZB (A, a)	FE (II) ION	non-polymer		55.8	2	Chemie (FE2)
29	AC, BC, GD, HD (a, A)	CHLORIDE ION	non-polymer		35.5	4	Chemie (CL)
30	FC, LD, PC, PT (a, A, d, D)	PHEOPHYTIN A	non-polymer		871.2	4	Chemie (PHO)
31	AD, DD, ED, HC, IS... (t, x, z, a, C...)	BETA-CAROTENE	non-polymer		536.9	22	Chemie (BCR)
32	IC, LC, QD, TR, XD... (a, A, C, L, l...)	1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL	non-polymer		795.1	8	Chemie (SQD)
33	JC, OD, SC, TT (a, A, d, D)	2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE	non-polymer		749.2	4	Chemie (PL9)
34	AE, BD, KC, LT, NS... (W, w, a, B, C...)	1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE	non-polymer		787.2	14	Chemie (LMG)
35	MC, QT (a, D)	BICARBONATE ION	non-polymer		61.0	2	Chemie (BCT)
36	LS, MS, OC, OV, PV... (C, a, c, B, A...)	DIGALACTOSYL DIACYL GLYCEROL (DGDG)	non-polymer		949.3	10	Chemie (DGD)
37	TD, XU (E, e)	PROTOPORPHYRIN IX CONTAINING FE	non-polymer		616.5	2	Chemie (HEM)

Contents of the asymmetric unit

Polymers	Number of chains	58
	Total formula weight	1211825.6
Non-Polymers*	Number of molecules	552
	Total formula weight	450262.5
All*	Total formula weight	1662088.1

*Water molecules are not included.