6JXD
Human nucleosome core particle with cohesive end DNA termini
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Histone H3.1 | polymer | 98 | 11504.5 | 1 | UniProt (P68431) Pfam (PF00125) In PDB | Homo sapiens (Human) | Histone H3/a,Histone H3/b,Histone H3/c,Histone H3/d,Histone H3/f,Histone H3/h,Histone H3/i,Histone H3/j,Histone H3/k,Histone H3/l |
2 | B | Histone H4 | polymer | 82 | 9279.9 | 1 | UniProt (P62805) Pfam (PF15511) In PDB | Homo sapiens (Human) | |
3 | C | Histone H2A type 1-B/E | polymer | 107 | 11794.8 | 1 | UniProt (P04908) Pfam (PF00125) Pfam (PF16211) In PDB | Homo sapiens (Human) | Histone H2A.2,Histone H2A/a,Histone H2A/m |
4 | D, H | Histone H2B type 1-J | polymer | 97 | 10907.6 | 2 | UniProt (P06899) Pfam (PF00125) In PDB | Homo sapiens (Human) | Histone H2B.1,Histone H2B.r,H2B/r |
5 | E | Histone H3.1 | polymer | 97 | 11433.4 | 1 | UniProt (P68431) Pfam (PF00125) In PDB | Homo sapiens (Human) | Histone H3/a,Histone H3/b,Histone H3/c,Histone H3/d,Histone H3/f,Histone H3/h,Histone H3/i,Histone H3/j,Histone H3/k,Histone H3/l |
6 | F | Histone H4 | polymer | 87 | 9990.8 | 1 | UniProt (P62805) Pfam (PF15511) In PDB | Homo sapiens (Human) | |
7 | G | Histone H2A type 1-B/E | polymer | 106 | 11637.6 | 1 | UniProt (P04908) Pfam (PF00125) Pfam (PF16211) In PDB | Homo sapiens (Human) | Histone H2A.2,Histone H2A/a,Histone H2A/m |
8 | I | DNA (147-MER) | polymer | 147 | 45193.8 | 1 | Homo sapiens | ||
9 | J | DNA (147-MER) | polymer | 147 | 45554.0 | 1 | Homo sapiens | ||
10 | J, A, E, I | MANGANESE (II) ION | non-polymer | 54.9 | 17 | Chemie (MN) | |||
11 | water | water | 18.0 | 52 | Chemie (HOH) |
Sequence modifications
C: 13 - 118 (UniProt: P04908)
PDB | External Database | Details |
---|---|---|
Arg 12 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 10 |
Total formula weight | 178203.9 | |
Non-Polymers* | Number of molecules | 17 |
Total formula weight | 933.9 | |
All* | Total formula weight | 179137.8 |