6JVY

Crystal structure of RBM38 in complex with single-stranded DNA

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A (A)	RNA-binding protein 38	polymer	128	13853.5	1	UniProt (Q9H0Z9) Pfam (PF00076)	Homo sapiens (Human)	CLL-associated antigen KW-5,HSRNASEB,RNA-binding motif protein 38,RNA-binding region-containing protein 1,ssDNA-binding protein SEB4
2	B (B)	DNA (5'-D(*TP*GP*TP*GP*TP*GP*TP*GP*TP*GP*TP*G)-3')	polymer	12	3755.4	1		Homo sapiens
3	C (A)	SULFATE ION	non-polymer		96.1	1	Chemie (SO4)
4	D, E (A, B)	water	water		18.0	127	Chemie (HOH)

Sequence modifications

A: 26 - 121 (UniProt: Q9H0Z9)

PDB	External Database	Details
Met -6	-	initiating methionine
Gly -5	-	expression tag
Ser -4	-	expression tag
Ser -3	-	expression tag
His -2	-	expression tag
His -1	-	expression tag
His 0	-	expression tag
His 1	-	expression tag
His 2	-	expression tag
His 3	-	expression tag
Ser 4	-	expression tag
Ser 5	-	expression tag
Gly 6	-	expression tag
Leu 7	-	expression tag
Val 8	-	expression tag
Pro 9	-	expression tag
Arg 10	-	expression tag
Gly 11	-	expression tag
Ser 12	-	expression tag
His 13	-	expression tag
Met 14	-	expression tag
Ala 15	-	expression tag
Ser 16	-	expression tag
Met 17	-	expression tag
Thr 18	-	expression tag
Gly 19	-	expression tag
Gly 20	-	expression tag
Gln 21	-	expression tag
Gln 22	-	expression tag
Met 23	-	expression tag
Gly 24	-	expression tag
Arg 25	-	expression tag

Contents of the asymmetric unit

Polymers	Number of chains	2
	Total formula weight	17609.0
Non-Polymers*	Number of molecules	1
	Total formula weight	96.1
All*	Total formula weight	17705.0

*Water molecules are not included.