6JPN
Crystal structure of the catalytic domain of a multi-domain alginate lyase Dp0100 from thermophilic bacterium Defluviitalea phaphyphila
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Alginate lyase | polymer | 772 | 88370.8 | 1 | Pfam (PF16332) Pfam (PF07940) UniProt (by SIFTS) (A0A4Y5UXE1) | Defluviitalea phaphyphila | |
| 2 | B (B) | beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid | branched | 898.6 | 1 | In PDB GlyTouCan (G61688UV) | |||
| 3 | C (A) | MANGANESE (II) ION | non-polymer | 54.9 | 1 | Chemie (MN) | |||
| 4 | D, E (A) | CALCIUM ION | non-polymer | 40.1 | 2 | Chemie (CA) | |||
| 5 | F (A) | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) | |||
| 6 | G (A) | water | water | 18.0 | 37 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 88370.8 | |
| Branched | Number of molecules | 1 |
| Total formula weight | 898.6 | |
| Non-Polymers* | Number of molecules | 4 |
| Total formula weight | 159.4 | |
| All* | Total formula weight | 89428.8 |
