6JJM
Crystal structure of Mumps virus hemagglutinin-neuraminidase bound to the oligosaccharide portion of the GM2 ganglioside
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B | HN protein | polymer | 489 | 54268.0 | 2 | UniProt (Q9WAF5) Pfam (PF00423) In PDB | Mumps rubulavirus | Hemagglutinin-neuraminidase |
2 | C, D, F, G | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 4 | In PDB GlyTouCan (G42666HT) | |||
3 | E, H | N-acetyl-alpha-neuraminic acid-(2-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)]beta-D-galactopyranose-(1-4)-beta-D-glucopyranose | branched | 836.7 | 2 | In PDB GlyTouCan (G28331VY) | |||
4 | A, B | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 4 | Chemie (NAG) | |||
5 | A, B | SULFATE ION | non-polymer | 96.1 | 2 | Chemie (SO4) | |||
6 | water | water | 18.0 | 467 | Chemie (HOH) |
Sequence modifications
A, B: 106 - 582 (UniProt: Q9WAF5)
PDB | External Database | Details |
---|---|---|
Glu 103 | - | expression tag |
Thr 104 | - | expression tag |
Gly 105 | - | expression tag |
Gly 583 | - | expression tag |
Thr 584 | - | expression tag |
Lys 585 | - | expression tag |
His 586 | - | expression tag |
His 587 | - | expression tag |
His 588 | - | expression tag |
His 589 | - | expression tag |
His 590 | - | expression tag |
His 591 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 108535.9 | |
Branched | Number of molecules | 6 |
Total formula weight | 3371.1 | |
Non-Polymers* | Number of molecules | 6 |
Total formula weight | 1077.0 | |
All* | Total formula weight | 112984.0 |