6J3Y
Structure of C2S2-type PSII-FCPII supercomplex from diatom
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, Y (A, a) | Photosystem II reaction center protein D1 | polymer | 344 | 38183.5 | 2 | Chaetoceros gracilis | ||
| 2 | B, Z (B, b) | Photosystem II chlorophyll protein CP47 | polymer | 509 | 56475.3 | 2 | Chaetoceros gracilis | ||
| 3 | AA, C (C, c) | Photosystem II chlorophyll protein CP43 | polymer | 471 | 51947.3 | 2 | Chaetoceros gracilis | ||
| 4 | BA, D (D, d) | Photosystem II reaction center protein D2 | polymer | 351 | 39069.5 | 2 | Chaetoceros gracilis | ||
| 5 | CA, E (E, e) | Cytochrome b559 subunit alpha | polymer | 84 | 9507.7 | 2 | Chaetoceros gracilis | ||
| 6 | DA, F (F, f) | Cytochrome b559 subunit beta | polymer | 43 | 4912.8 | 2 | Chaetoceros gracilis | ||
| 7 | EA, G (H, h) | Photosystem II reaction center protein H | polymer | 67 | 7418.8 | 2 | UniProt (B7XBY7) | Chaetoceros gracilis | PSII-H |
| 8 | FA, H (I, i) | Photosystem II reaction center protein I | polymer | 38 | 4427.2 | 2 | Chaetoceros gracilis | ||
| 9 | GA, I (J, j) | Photosystem II reaction center protein J | polymer | 39 | 4093.8 | 2 | Chaetoceros gracilis | ||
| 10 | HA, J (K, k) | Photosystem II reaction center protein K | polymer | 44 | 4978.0 | 2 | Chaetoceros gracilis | ||
| 11 | IA, K (L, l) | Photosystem II reaction center protein L | polymer | 38 | 4367.1 | 2 | Chaetoceros gracilis | ||
| 12 | JA, L (M, m) | Photosystem II reaction center protein M | polymer | 131 | 14180.4 | 2 | Chaetoceros gracilis | ||
| 13 | KA, M (O, o) | Extrinsic protein in photosystem II | polymer | 248 | 26762.3 | 2 | UniProt (B6ZHE8) | Chaetoceros gracilis | Extrinsic protein O of oxygen-evolving complex |
| 14 | LA, N (T, t) | Photosystem II reaction center protein T | polymer | 31 | 3711.5 | 2 | Chaetoceros gracilis | ||
| 15 | MA, O (U, u) | Extrinsic protein in photosystem II | polymer | 93 | 10137.5 | 2 | UniProt (B6ZHF0) | Chaetoceros gracilis | Extrinsic protein U of oxygen-evolving complex |
| 16 | NA, P (V, v) | Cytochrome c-550 | polymer | 137 | 14893.8 | 2 | UniProt (B6ZHF4) | Chaetoceros gracilis | Extrinsic protein V of oxygen-evolving complex,Cytochrome c550 |
| 17 | OA, Q (Y, y) | Photosystem II reaction center protein Ycf12 | polymer | 34 | 3609.5 | 2 | Chaetoceros gracilis | ||
| 18 | PA, R (X, x) | Photosystem II reaction center X protein | polymer | 38 | 3859.6 | 2 | UniProt (B6ZHF2) | Chaetoceros gracilis | Photosystem II reaction center protein X |
| 19 | QA, S (Z, z) | Photosystem II reaction center protein Z | polymer | 61 | 6528.9 | 2 | Chaetoceros gracilis | ||
| 20 | RA, T (Q, q) | Extrinsic protein in photosystem II | polymer | 155 | 17088.1 | 2 | UniProt (B6ZHE9) | Chaetoceros gracilis | Extrinsic protein Q of oxygen-evolving complex |
| 21 | SA, U (W, w) | Photosystem II reaction center protein W | polymer | 72 | 7848.7 | 2 | Chaetoceros gracilis | ||
| 22 | TA, V (0, 5) | Unknown protein 0 | polymer | 31 | 2656.3 | 2 | Chaetoceros gracilis | ||
| 23 | UA, W (1, 6) | Unknown protein 1 | polymer | 30 | 2571.2 | 2 | Chaetoceros gracilis | ||
| 24 | VA, X (2, 7) | Unknown protein 2 | polymer | 10 | 869.1 | 2 | Chaetoceros gracilis | ||
| 25 | AB, BB, CB, DB, WA... (11, 12, 13, 14, 31...) | Fucoxanthin chlorophyll a/c-binding protein Lhcf1, FCP1 | polymer | 207 | 22098.2 | 8 | Chaetoceros gracilis | ||
| 26 | DE, EB (a, A) | FE (II) ION | non-polymer | 55.8 | 2 | Chemie (FE2) PubChem (27284) | |||
| 27 | AC, AF, AH, AI, AL... (B, b, w, 12, 33...) | CHLOROPHYLL A | non-polymer | 893.5 | 158 | Chemie (CLA) | |||
| 28 | EG, FE, GB, GD (d, a, A, D) | PHEOPHYTIN A | non-polymer | 871.2 | 4 | Chemie (PHO) | |||
| 29 | BF, BG, CC, CF, DC... (b, c, B, C, a...) | BETA-CAROTENE | non-polymer | 536.9 | 24 | Chemie (BCR) PubChem (573) PubChem (21672398) PubChem (176490061) PubChem (177696266) PubChem (46783370) PubChem (46846294) PubChem (54603957) PubChem (54612003) PubChem (5315709) PubChem (5353436) PubChem (5356616) PubChem (5927371) PubChem (86765360) PubChem (6477957) PubChem (9828626) PubChem (91827292) PubChem (10256668) PubChem (92863346) PubChem (92863347) PubChem (92863348) PubChem (12305639) PubChem (12305640) PubChem (12305642) PubChem (12305644) PubChem (12305647) PubChem (12305652) PubChem (5280489) PubChem (92863345) PubChem (100990628) PubChem (101525094) PubChem (101525095) PubChem (124919640) PubChem (124919639) PubChem (129651951) PubChem (132274419) PubChem (146673260) PubChem (152743364) PubChem (160505766) PubChem (145925599) PubChem (159562859) PubChem (172654026) PubChem (172878405) PubChem (173398668) | |||
| 30 | FF, GC, IE, JB, PG... (b, B, a, A, l...) | 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL | non-polymer | 795.1 | 6 | Chemie (SQD) PubChem (25147486) PubChem (25235342) PubChem (42607399) PubChem (5459390) PubChem (159321) PubChem (9810997) PubChem (9918745) PubChem (481096) PubChem (10219110) PubChem (10373133) PubChem (14463145) PubChem (102201395) PubChem (134765349) | |||
| 31 | JE, KB (a, A) | BICARBONATE ION | non-polymer | 61.0 | 2 | Chemie (BCT) PubChem (769) | |||
| 32 | GF, HC, KE, LB, QG... (b, B, a, A, l...) | 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE | non-polymer | 723.0 | 8 | Chemie (LHG) PubChem (446440) PubChem (46936292) PubChem (73416066) PubChem (65144) PubChem (9547104) PubChem (11846227) PubChem (13305396) PubChem (138986743) | |||
| 33 | AE, CD, DF, EC, EF... (W, C, b, B, 32...) | 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE | non-polymer | 787.2 | 14 | Chemie (LMG) | |||
| 34 | JF, KC (c, C) | CA-MN4-O5 CLUSTER | non-polymer | 339.8 | 2 | Chemie (OEX) | |||
| 35 | AD, AG, BD, NG, OG... (C, c, h, j, H...) | DIGALACTOSYL DIACYL GLYCEROL (DGDG) | non-polymer | 949.3 | 8 | Chemie (DGD) PubChem (24865462) PubChem (24865463) PubChem (448441) PubChem (50904896) PubChem (53480668) PubChem (46936671) PubChem (447899) PubChem (4629344) PubChem (15991538) PubChem (134746152) PubChem (154573294) PubChem (140529801) PubChem (171123158) | |||
| 36 | FG, HD, IG, KD (d, D) | 2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE | non-polymer | 749.2 | 4 | Chemie (PL9) PubChem (20286) PubChem (23304240) PubChem (21881166) PubChem (5375177) PubChem (6323474) PubChem (6325820) PubChem (6433402) | |||
| 37 | LG, MD, VG, XD (f, E, v, V) | PROTOPORPHYRIN IX CONTAINING FE | non-polymer | 616.5 | 4 | Chemie (HEM) | |||
| 38 | AJ, AK, AM, BK, BM... (14, 31, 34, 12, 32...) | (3S,3'S,5R,5'R,6S,6'R,8'R)-3,5'-dihydroxy-8-oxo-6',7'-didehydro-5,5',6,6',7,8-hexahydro-5,6-epoxy-beta,beta-caroten-3'- yl acetate | non-polymer | 658.9 | 48 | Chemie (A86) PubChem (21776532) PubChem (91530) PubChem (46781664) PubChem (541529) PubChem (59370904) PubChem (59438846) PubChem (177442568) PubChem (89808300) PubChem (90784335) PubChem (10009558) PubChem (88873479) PubChem (91266697) PubChem (15559433) PubChem (15559434) PubChem (15559435) PubChem (5281239) PubChem (101608998) PubChem (102200897) PubChem (5364094) PubChem (124298579) PubChem (124298578) PubChem (124298576) PubChem (102200898) PubChem (102232483) PubChem (125183403) PubChem (9961263) PubChem (123264561) PubChem (124298577) PubChem (140222158) PubChem (15559432) PubChem (162962337) PubChem (163285374) PubChem (138115313) PubChem (140222160) PubChem (154828419) PubChem (162962338) PubChem (162962339) PubChem (162962340) PubChem (162962341) PubChem (172812670) | |||
| 39 | HK, TH (32, 12) | DODECYL-ALPHA-D-MALTOSIDE | non-polymer | 510.6 | 2 | Chemie (LMU) PubChem (16220143) PubChem (114880) PubChem (24802120) PubChem (25021193) PubChem (44119948) PubChem (445456) PubChem (46936627) PubChem (53393702) PubChem (56845466) PubChem (3481630) PubChem (58112562) PubChem (58253045) PubChem (60087035) PubChem (59615220) PubChem (68322761) PubChem (68338004) PubChem (68441652) PubChem (70796428) PubChem (70813879) PubChem (70839937) PubChem (2802066) PubChem (75487624) PubChem (89796216) PubChem (9849225) PubChem (91094859) PubChem (91608950) PubChem (10413991) PubChem (90817611) PubChem (95566088) PubChem (95566089) PubChem (95566090) PubChem (96327540) PubChem (97038234) PubChem (97038235) PubChem (97294875) PubChem (98046621) PubChem (98046622) PubChem (98046623) PubChem (100976848) PubChem (101111379) PubChem (101111381) PubChem (95566087) PubChem (102565427) PubChem (102219025) PubChem (117716045) PubChem (117753833) PubChem (118443377) PubChem (123281924) PubChem (124184997) PubChem (124196217) PubChem (124196220) PubChem (126735853) PubChem (126735860) PubChem (129720403) PubChem (140505128) PubChem (153835411) PubChem (134694723) PubChem (155885597) PubChem (140479759) PubChem (140841257) PubChem (169619620) PubChem (154810097) PubChem (159812235) PubChem (173767704) PubChem (173885518) PubChem (163184859) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 56 |
| Total formula weight | 856981.3 | |
| Non-Polymers* | Number of molecules | 286 |
| Total formula weight | 225734.9 | |
| All* | Total formula weight | 1082716.2 |
