6ISG
Structure of 9N-I DNA polymerase incorporation with dG in the active site
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A (A) | DNA polymerase | polymer | 783 | 90939.8 | 1 | UniProt (Q56366) Pfam (PF03104) Pfam (PF00136) | Thermococcus sp. 9oN-7 | |
2 | B (C) | DNA (5'-D(*GP*CP*GP*GP*AP*CP*TP*GP*CP*TP*TP*AP*CP*CP*G)-3') | polymer | 15 | 4586.0 | 1 | synthetic construct | ||
3 | C (D) | DNA (5'-D(*GP*AP*CP*GP*GP*TP*AP*AP*GP*CP*AP*GP*TP*CP*CP*G)-3') | polymer | 18 | 5566.6 | 1 | synthetic construct | ||
4 | D (A) | PYROPHOSPHATE | non-polymer | 178.0 | 1 | Chemie (PPV) | |||
5 | E, F, G, H, I (A, D) | CALCIUM ION | non-polymer | 40.1 | 5 | Chemie (CA) | |||
6 | J, K, L (A, C, D) | water | water | 18.0 | 30 | Chemie (HOH) |
Sequence modifications
A: 1 - 775 (UniProt: Q56366)
PDB | External Database | Details |
---|---|---|
Ala 141 | Asp 141 | engineered mutation |
Ala 143 | Glu 143 | engineered mutation |
Leu 485 | Ala 485 | engineered mutation |
Leu 776 | - | expression tag |
Glu 777 | - | expression tag |
His 778 | - | expression tag |
His 779 | - | expression tag |
His 780 | - | expression tag |
His 781 | - | expression tag |
His 782 | - | expression tag |
His 783 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 3 |
Total formula weight | 101092.4 | |
Non-Polymers* | Number of molecules | 6 |
Total formula weight | 378.4 | |
All* | Total formula weight | 101470.8 |