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6IBS

Crystal structure of NDM-1 beta-lactamase in complex with boronic inhibitor cpd 6

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Metallo-beta-lactamase type 2polymer24425860.12UniProt (C7C422)
Pfam (PF00753)
Klebsiella pneumoniaeB2 metallo-beta-lactamase,Beta-lactamase type II,Metallo-beta-lactamase NDM-1,Metallo-beta-lactamase type II,New Delhi metallo-beta-lactamase-1,NDM-1
2C, D, H, I
(A, B)
ZINC IONnon-polymer65.44Chemie (ZN)
3E, J
(A, B)
[7-[(2-methylpropan-2-yl)oxycarbonylamino]-1-benzothiophen-2-yl]-tris(oxidanyl)boranuidenon-polymer310.22Chemie (HB8)
4F, G, K, L
(A, B)
CALCIUM IONnon-polymer40.14Chemie (CA)
5M, N
(A, B)
waterwater18.0370Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight51720.3
Non-Polymers*Number of molecules10
Total formula weight1042.3
All*Total formula weight52762.5
*Water molecules are not included.

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PDB entries from 2025-07-23

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