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6HVS

Yeast 20S proteasome with human beta2i (1-53) in complex with 18

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, OProteasome subunit alpha type-2polymer25027191.82UniProt (P23639)
Pfam (PF10584)
Pfam (PF00227)
In PDB
Saccharomyces cerevisiae S288CMacropain subunit Y7,Multicatalytic endopeptidase complex subunit Y7,Proteasome component Y7,Proteinase YSCE subunit 7
2B, PProteasome subunit alpha type-3polymer25828748.22UniProt (P23638)
Pfam (PF10584)
Pfam (PF00227)
In PDB
Saccharomyces cerevisiae S288CMacropain subunit Y13,Multicatalytic endopeptidase complex subunit Y13,Proteasome component Y13,Proteinase YSCE subunit 13
3C, QProteasome subunit alpha type-4polymer25428478.12UniProt (P40303)
Pfam (PF10584)
Pfam (PF00227)
In PDB
Saccharomyces cerevisiae S288CMacropain subunit PRE6,Multicatalytic endopeptidase complex subunit PRE6,Proteasome component PRE6,Proteinase YSCE subunit PRE6
4D, RProteasome subunit alpha type-5polymer26028649.12UniProt (P32379)
Pfam (PF10584)
Pfam (PF00227)
In PDB
Saccharomyces cerevisiae S288CMacropain subunit PUP2,Multicatalytic endopeptidase complex subunit PUP2,Proteasome component PUP2,Proteinase YSCE subunit PUP2
5E, SProteasome subunit alpha type-6polymer23425634.02UniProt (P40302)
Pfam (PF00227)
Pfam (PF10584)
In PDB
Saccharomyces cerevisiae S288CMacropain subunit PRE5,Multicatalytic endopeptidase complex subunit PRE5,Proteasome component PRE5,Proteinase YSCE subunit PRE5
6F, TProbable proteasome subunit alpha type-7polymer28831575.12UniProt (P21242)
Pfam (PF10584)
Pfam (PF00227)
In PDB
Saccharomyces cerevisiae S288CMacropain subunit C1,Multicatalytic endopeptidase complex subunit C1,Proteasome component C1,Proteinase YSCE subunit 1
7G, UProteasome subunit alpha type-1polymer25228033.82UniProt (P21243)
Pfam (PF10584)
Pfam (PF00227)
In PDB
Saccharomyces cerevisiae S288CMacropain subunit C7-alpha,Multicatalytic endopeptidase complex C7,Proteasome component C7-alpha,Proteasome component Y8,Proteinase YSCE subunit 7,SCL1 suppressor protein
8H, VProteasome subunit beta type-10,Proteasome subunit beta type-2polymer22624443.72UniProt (P40306)
UniProt (P25043)
Pfam (PF00227)
Pfam (PF12465)
In PDB
Homo sapiens (Human)Low molecular mass protein 10,Macropain subunit MECl-1,Multicatalytic endopeptidase complex subunit MECl-1,Proteasome MECl-1,Proteasome subunit beta-2i,Macropain subunit PUP1,Multicatalytic endopeptidase complex subunit PUP1,Proteasome component PUP1,Proteinase YSCE subunit PUP1
9I, WProteasome subunit beta type-3polymer20522627.82UniProt (P25451)
Pfam (PF00227)
In PDB
Saccharomyces cerevisiae S288CMacropain subunit PUP3,Multicatalytic endopeptidase complex subunit PUP3,Proteasome component PUP3
10J, XProteasome subunit beta type-4polymer19822545.72UniProt (P22141)
Pfam (PF00227)
In PDB
Saccharomyces cerevisiae S288CMacropain subunit C11,Multicatalytic endopeptidase complex subunit C11,Proteasome component C11,Proteinase YSCE subunit 11
11K, YProteasome subunit beta type-5polymer21223325.22UniProt (P30656)
Pfam (PF00227)
In PDB
Saccharomyces cerevisiae S288CMacropain subunit PRE2,Multicatalytic endopeptidase complex subunit PRE2,Proteasome component PRE2,Proteinase YSCE subunit PRE2
12L, ZProteasome subunit beta type-6polymer22224883.92UniProt (P23724)
Pfam (PF00227)
In PDB
Saccharomyces cerevisiae S288CMulticatalytic endopeptidase complex subunit C5,Proteasome component C5
13M, aProteasome subunit beta type-7polymer24627200.92UniProt (P30657)
Pfam (PF00227)
In PDB
Saccharomyces cerevisiae S288CMacropain subunit PRE4,Multicatalytic endopeptidase complex subunit PRE4,Proteasome component PRE4,Proteinase YSCE subunit PRE4
14N, bProteasome subunit beta type-1polymer19621517.22UniProt (P38624)
Pfam (PF00227)
In PDB
Saccharomyces cerevisiae S288CMacropain subunit PRE3,Multicatalytic endopeptidase complex subunit PRE3,Proteasome component PRE3,Proteinase YSCE subunit PRE3
15G, I, K, N, V...MAGNESIUM IONnon-polymer24.38Chemie (MG)
16G, UCHLORIDE IONnon-polymer35.52Chemie (CL)
17H, K, V, Y(2~{S})-~{N}-[2-[[(2~{S})-1-[4-(aminomethyl)phenyl]-4-methylsulfonyl-butan-2-yl]amino]-2-oxidanylidene-ethyl]-2-[[(2~{S})-2-azido-3-phenyl-propanoyl]amino]-4-methyl-pentanamidenon-polymer599.74Chemie (GRT)
18waterwater18.0229Chemie (HOH)
Sequence modifications
H, V: 1 - 53 (UniProt: P40306)
H, V: 54 - 226 (UniProt: P25043)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains28
Total formula weight729709.2
Non-Polymers*Number of molecules14
Total formula weight2664.3
All*Total formula weight732373.5
*Water molecules are not included.

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PDB entries from 2024-04-24

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