6HMA
Improved model derived from cryo-EM map of Staphylococcus aureus large ribosomal subunit
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | 23S ribosomal RNA | polymer | 2923 | 946738.7 | 1 | GenBank (1418434134) | Staphylococcus aureus | |
| 2 | B (B) | 5S ribosomal RNA | polymer | 115 | 36974.9 | 1 | GenBank (1434110260) | Staphylococcus aureus | |
| 3 | C (C) | 50S ribosomal protein L2 | polymer | 274 | 29827.6 | 1 | UniProt (Q2YYP9) Pfam (PF00181) Pfam (PF03947) UniProt (by SIFTS) (P60430) | Staphylococcus aureus | |
| 4 | D (D) | 50S ribosomal protein L3 | polymer | 215 | 23199.5 | 1 | UniProt (Q2YYP6) Pfam (PF00297) UniProt (by SIFTS) (Q2FW06) | Staphylococcus aureus | |
| 5 | E (E) | 50S ribosomal protein L4 | polymer | 206 | 22364.5 | 1 | UniProt (Q2YYP7) Pfam (PF00573) UniProt (by SIFTS) (Q2FW07) | Staphylococcus aureus | |
| 6 | F (F) | 50S ribosomal protein L5 | polymer | 158 | 17651.5 | 1 | UniProt (A0A2S6D0C0) Pfam (PF00673) Pfam (PF00281) UniProt (by SIFTS) (Q2FW18) | Staphylococcus aureus | |
| 7 | G (G) | 50S ribosomal protein L6 | polymer | 175 | 19501.2 | 1 | UniProt (Q2YYL2) Pfam (PF00347) UniProt (by SIFTS) (Q2FW21) | Staphylococcus aureus | |
| 8 | H (H) | 50S ribosomal protein L13 | polymer | 145 | 16359.4 | 1 | UniProt (Q2YYM8) Pfam (PF00572) UniProt (by SIFTS) (Q2FW38) | Staphylococcus aureus | |
| 9 | I (I) | 50S ribosomal protein L14 | polymer | 122 | 13157.3 | 1 | UniProt (Q2YYK7) Pfam (PF00238) UniProt (by SIFTS) (Q2FW16) | Staphylococcus aureus | |
| 10 | J (J) | 50S ribosomal protein L15 | polymer | 146 | 15628.9 | 1 | UniProt (Q2YYL6) Pfam (PF00828) UniProt (by SIFTS) (P0A0F8) | Staphylococcus aureus | |
| 11 | K (K) | 50S ribosomal protein L16 | polymer | 137 | 15599.4 | 1 | UniProt (Q2YYQ3) Pfam (PF00252) UniProt (by SIFTS) (Q2FW13) | Staphylococcus aureus | |
| 12 | L (L) | 50S ribosomal protein L17 | polymer | 120 | 13583.5 | 1 | UniProt (Q2YYM3) Pfam (PF01196) UniProt (by SIFTS) (Q2FW33) | Staphylococcus aureus | |
| 13 | M (M) | 50S ribosomal protein L18 | polymer | 119 | 13124.1 | 1 | UniProt (W8TRE0) Pfam (PF00861) UniProt (by SIFTS) (Q2FW22) | Staphylococcus aureus | |
| 14 | N (N) | 50S ribosomal protein L19 | polymer | 116 | 13392.8 | 1 | UniProt (Q2YXM4) Pfam (PF01245) UniProt (by SIFTS) (Q2FZ42) | Staphylococcus aureus | |
| 15 | O (O) | 50S ribosomal protein L20 | polymer | 116 | 13459.9 | 1 | UniProt (Q2YTB1) Pfam (PF00453) UniProt (by SIFTS) (Q2FXQ1) | Staphylococcus aureus | |
| 16 | P (P) | 50S ribosomal protein L21 | polymer | 102 | 11354.1 | 1 | UniProt (Q2YT83) Pfam (PF00829) UniProt (by SIFTS) (Q2FXS8) | Staphylococcus aureus | |
| 17 | Q (Q) | 50S ribosomal protein L22 | polymer | 112 | 12328.4 | 1 | UniProt (Q2YYQ1) Pfam (PF00237) UniProt (by SIFTS) (Q2FW11) | Staphylococcus aureus | |
| 18 | R (R) | 50S ribosomal protein L23 | polymer | 89 | 10380.1 | 1 | UniProt (Q2YYP8) Pfam (PF00276) UniProt (by SIFTS) (Q2FW08) | Staphylococcus aureus | |
| 19 | S (S) | 50S ribosomal protein L24 | polymer | 103 | 11316.2 | 1 | UniProt (Q2YYK8) Pfam (PF00467) Pfam (PF17136) UniProt (by SIFTS) (Q2FW17) | Staphylococcus aureus | |
| 20 | T (T) | 50S ribosomal protein L25 | polymer | 94 | 10462.2 | 1 | UniProt (A0A133Q8Z9) Pfam (PF01386) UniProt (by SIFTS) (Q2FJE0) | Staphylococcus aureus | General stress protein CTC |
| 21 | U (U) | 50S ribosomal protein L27 | polymer | 79 | 8595.7 | 1 | UniProt (Q2YT85) Pfam (PF01016) UniProt (by SIFTS) (Q2FXT0) | Staphylococcus aureus | |
| 22 | V (V) | 50S ribosomal protein L28 | polymer | 49 | 5499.4 | 1 | UniProt (Q2YXJ2) Pfam (PF00830) UniProt (by SIFTS) (Q2FZ60) | Staphylococcus aureus | |
| 23 | W (W) | 50S ribosomal protein L29 | polymer | 67 | 7845.9 | 1 | UniProt (Q2YYN0) Pfam (PF00831) UniProt (by SIFTS) (Q2FW14) | Staphylococcus aureus | |
| 24 | X (X) | 50S ribosomal protein L30 | polymer | 58 | 6434.5 | 1 | UniProt (Q2YYL5) Pfam (PF00327) UniProt (by SIFTS) (P0A0G2) | Staphylococcus aureus | |
| 25 | Y (Z) | 50S ribosomal protein L32 | polymer | 48 | 5569.6 | 1 | UniProt (A0A1Q8DAT0) Pfam (PF01783) UniProt (by SIFTS) (Q2FZF1) | Staphylococcus aureus | |
| 26 | Z (1) | 50S ribosomal protein L33 | polymer | 47 | 5684.6 | 1 | UniProt (A0A077V2P0) Pfam (PF00471) UniProt (by SIFTS) (Q2FYU6) | Staphylococcus aureus | |
| 27 | AA (2) | 50S ribosomal protein L34 | polymer | 43 | 5252.4 | 1 | UniProt (Q2YZB6) Pfam (PF00468) UniProt (by SIFTS) (Q2FUQ0) | Staphylococcus aureus | |
| 28 | BA (3) | 50S ribosomal protein L35 | polymer | 64 | 7462.0 | 1 | UniProt (Q2YTB0) Pfam (PF01632) UniProt (by SIFTS) (Q2FXQ0) | Staphylococcus aureus | |
| 29 | CA (4) | 50S ribosomal protein L36 | polymer | 37 | 4318.4 | 1 | UniProt (A0A077UGV8) Pfam (PF00444) UniProt (by SIFTS) (Q2FW29) | Staphylococcus aureus | |
| 30 | AB, AC, AD, AE, AF... (A, C, J, K, U...) | MAGNESIUM ION | non-polymer | 24.3 | 237 | Chemie (MG) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 29 |
| Total formula weight | 1323066.7 | |
| Non-Polymers* | Number of molecules | 237 |
| Total formula weight | 5760.3 | |
| All* | Total formula weight | 1328827.0 |
