6HM2
Structure in P1 form of the PBP AgtB in complex with agropinic acid from A.tumefacien R10
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D, E (A, B, C, D, E) | Agropine permease | polymer | 341 | 37291.9 | 5 | UniProt (W8FRA6) | Agrobacterium tumefaciens LBA4213 (Ach5) | |
| 2 | F, J, N, R, W (A, B, C, D, E) | agropinic acid | non-polymer | 291.3 | 5 | Chemie (G9Z) | |||
| 3 | G, H, K, L, O... (A, B, C, D) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 9 | Chemie (EDO) | |||
| 4 | I, M, Q, V (A, B, C, D) | SODIUM ION | non-polymer | 23.0 | 4 | Chemie (NA) | |||
| 5 | AA, BA, X, Y, Z (D, E, A, B, C) | water | water | 18.0 | 1019 | Chemie (HOH) |
Sequence modifications
A, B, C, D, E: 30 - 342 (UniProt: W8FRA6)
| PDB | External Database | Details |
|---|---|---|
| Met 8 | - | initiating methionine |
| Gly 9 | - | expression tag |
| Ser 10 | - | expression tag |
| Ser 11 | - | expression tag |
| His 12 | - | expression tag |
| His 13 | - | expression tag |
| His 14 | - | expression tag |
| His 15 | - | expression tag |
| His 16 | - | expression tag |
| His 17 | - | expression tag |
| Ser 18 | - | expression tag |
| Ser 19 | - | expression tag |
| Gly 20 | - | expression tag |
| Leu 21 | - | expression tag |
| Val 22 | - | expression tag |
| Pro 23 | - | expression tag |
| Arg 24 | - | expression tag |
| Gly 25 | - | expression tag |
| Ser 26 | - | expression tag |
| His 27 | - | expression tag |
| Met 28 | - | expression tag |
| Met 29 | - | expression tag |
| His 343 | - | expression tag |
| His 344 | - | expression tag |
| His 345 | - | expression tag |
| His 346 | - | expression tag |
| His 347 | - | expression tag |
| His 348 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 5 |
| Total formula weight | 186459.5 | |
| Non-Polymers* | Number of molecules | 18 |
| Total formula weight | 2106.8 | |
| All* | Total formula weight | 188566.3 |






