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6HAX

Crystal structure of PROTAC 2 in complex with the bromodomain of human SMARCA2 and pVHL:ElonginC:ElonginB

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, EProbable global transcription activator SNF2L2polymer12314380.52UniProt (P51531)
Pfam (PF00439)
In PDB
Homo sapiens (Human)ATP-dependent helicase SMARCA2,BRG1-associated factor 190B,BAF190B,Protein brahma homolog,hBRM,SNF2-alpha,SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2
2B, Fvon Hippel-Lindau disease tumor suppressorpolymer16218702.32UniProt (P40337)
Pfam (PF01847)
Pfam (PF17211)
In PDB
Homo sapiens (Human)Protein G7,pVHL
3C, GElongin-Cpolymer9710974.62UniProt (Q15369)
Pfam (PF03931)
In PDB
Homo sapiens (Human)EloC,Elongin 15 kDa subunit,RNA polymerase II transcription factor SIII subunit C,SIII p15,Transcription elongation factor B polypeptide 1
4D, HElongin-Bpolymer10411748.42UniProt (Q15370)
Pfam (PF00240)
In PDB
Homo sapiens (Human)EloB,Elongin 18 kDa subunit,RNA polymerase II transcription factor SIII subunit B,SIII p18,Transcription elongation factor B polypeptide 2
5A, B, C, D, E...1,2-ETHANEDIOLnon-polymer62.114Chemie (EDO)
6B, F(2~{S},4~{R})-~{N}-[[2-[2-[4-[[4-[3-azanyl-6-(2-hydroxyphenyl)pyridazin-4-yl]piperazin-1-yl]methyl]phenyl]ethoxy]-4-(4-methyl-1,3-thiazol-5-yl)phenyl]methyl]-1-[(2~{S})-2-[(1-fluoranylcyclopropyl)carbonylamino]-3,3-dimethyl-butanoyl]-4-oxidanyl-pyrrolidine-2-carboxamidenon-polymer920.12Chemie (FWZ)
7B4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACIDnon-polymer238.31Chemie (EPE)
8waterwater18.0213Chemie (HOH)
Sequence modifications
A, E: 1373 - 1493 (UniProt: P51531)
PDBExternal DatabaseDetails
Ser 1371-expression tag
Met 1372-expression tag
B, F: 54 - 213 (UniProt: P40337)
PDBExternal DatabaseDetails
Gly 52-expression tag
Ser 53-expression tag
C, G: 17 - 112 (UniProt: Q15369)
PDBExternal DatabaseDetails
Met 16-initiating methionine
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains8
Total formula weight111611.7
Non-Polymers*Number of molecules17
Total formula weight2947.5
All*Total formula weight114559.2
*Water molecules are not included.

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PDB entries from 2024-05-01

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