6HAA
Structure of a covalent complex of endo-Xyloglucanase from Cellvibrio japonicus after reacting with XXXG(2F)-beta-DNP
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B | Cellulase, putative, cel5D | polymer | 396 | 44338.1 | 2 | UniProt (B3PD52) Pfam (PF00150) In PDB | Cellvibrio japonicus (Pseudomonas fluorescens subsp. cellulosa) | |
2 | C | beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-2-deoxy-2-fluoro-alpha-D-glucopyranose | branched | 932.8 | 1 | In PDB GlyTouCan (G07540IS) | |||
3 | D | alpha-D-xylopyranose-(1-6)-beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-2-deoxy-2-fluoro-alpha-D-glucopyranose | branched | 1064.9 | 1 | In PDB GlyTouCan (G06479TB) | |||
4 | A, B | GLYCEROL | non-polymer | 92.1 | 3 | Chemie (GOL) | |||
5 | A, B | SULFATE ION | non-polymer | 96.1 | 2 | Chemie (SO4) | |||
6 | A | TRIETHYLENE GLYCOL | non-polymer | 150.2 | 2 | Chemie (PGE) | |||
7 | A, B | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID | non-polymer | 195.2 | 2 | Chemie (MES) | |||
8 | B | PENTAETHYLENE GLYCOL | non-polymer | 238.3 | 1 | Chemie (1PE) | |||
9 | water | water | 18.0 | 357 | Chemie (HOH) |
Sequence modifications
A, B: 96 - 468 (UniProt: B3PD52)
PDB | External Database | Details |
---|---|---|
Met 73 | - | initiating methionine |
Gly 74 | - | expression tag |
Ser 75 | - | expression tag |
Ser 76 | - | expression tag |
His 77 | - | expression tag |
His 78 | - | expression tag |
His 79 | - | expression tag |
His 80 | - | expression tag |
His 81 | - | expression tag |
His 82 | - | expression tag |
Ser 83 | - | expression tag |
Ser 84 | - | expression tag |
Gly 85 | - | expression tag |
Leu 86 | - | expression tag |
Val 87 | - | expression tag |
Pro 88 | - | expression tag |
Arg 89 | - | expression tag |
Gly 90 | - | expression tag |
Ser 91 | - | expression tag |
His 92 | - | expression tag |
Met 93 | - | expression tag |
Ala 94 | - | expression tag |
Ser 95 | - | expression tag |
Ala 255 | Glu 255 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 88676.3 | |
Branched | Number of molecules | 2 |
Total formula weight | 1997.7 | |
Non-Polymers* | Number of molecules | 10 |
Total formula weight | 1397.5 | |
All* | Total formula weight | 92071.5 |