6H9Y
Unraveling the role of the secretor antigen in human rotavirus attachment to histo-blood group antigens
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Outer capsid protein VP4 | polymer | 162 | 18550.3 | 2 | UniProt (A0A2K9UWM4) Pfam (PF00426) UniProt (by SIFTS) (Q0PRF2) | Human rotavirus A | |
| 2 | C (C) | beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 383.3 | 1 | In PDB GlyTouCan (G00056MO) | |||
| 3 | D (B) | 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | non-polymer | 209.2 | 1 | Chemie (BTB) | |||
| 4 | E, F (A, B) | water | water | 18.0 | 512 | Chemie (HOH) |
Sequence modifications
A, B: 228 - 386 (UniProt: A0A2K9UWM4)
| PDB | External Database | Details |
|---|---|---|
| Gly 225 | - | expression tag |
| Ser 226 | - | expression tag |
| Met 227 | - | expression tag |
| Asn 323 | Asp 160 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 37100.7 | |
| Branched | Number of molecules | 1 |
| Total formula weight | 383.3 | |
| Non-Polymers* | Number of molecules | 1 |
| Total formula weight | 209.2 | |
| All* | Total formula weight | 37693.3 |
