6H70
GI.1 human norovirus protruding domain in complex with Nano-62 and 2-fucosyllactose (2FL)
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B | Capsid protein VP1 | polymer | 292 | 31182.9 | 2 | UniProt (Q83884) Pfam (PF08435) In PDB | Norwalk virus (strain GI/Human/United States/Norwalk/1968) (Hu/NV/NV/1968/US) | CP,p59 |
| 2 | C, D | Nanobody (VHH) Nano-62 | polymer | 141 | 15651.5 | 2 | Vicugna pacos | ||
| 3 | E, F | alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-4)-alpha-D-glucopyranose | branched | 488.4 | 2 | In PDB GlyTouCan (G94133JU) | |||
| 4 | A, B | SODIUM ION | non-polymer | 23.0 | 2 | Chemie (NA) | |||
| 5 | A, B | 1,2-ETHANEDIOL | non-polymer | 62.1 | 4 | Chemie (EDO) | |||
| 6 | water | water | 18.0 | 546 | Chemie (HOH) |
Sequence modifications
A, B: 227 - 518 (UniProt: Q83884)
| PDB | External Database | Details |
|---|---|---|
| Ile 253 | Met 253 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 93669.0 | |
| Branched | Number of molecules | 2 |
| Total formula weight | 976.9 | |
| Non-Polymers* | Number of molecules | 6 |
| Total formula weight | 294.3 | |
| All* | Total formula weight | 94940.1 |
