6H5E
Crystal Structure of the GatD/MurT Enzyme Complex from Staphylococcus aureus with bound AMPPNP
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, C | SA1707 protein | polymer | 251 | 28539.2 | 2 | UniProt (A0A0H3JN63) Pfam (PF07685) Pfam (PF00117) In PDB | Staphylococcus aureus | GatD |
2 | B, D | DUF1727 domain-containing protein | polymer | 437 | 49250.9 | 2 | UniProt (A0A0D6HDA2) Pfam (PF08245) Pfam (PF08353) UniProt (by SIFTS) (A0A0H3JUU7) In PDB | Staphylococcus aureus | Mur ligase middle domain protein,UDP-N-acetylmuramate--alanine ligase,MurT |
3 | B, D | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) | |||
4 | B, D | PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER | non-polymer | 506.2 | 2 | Chemie (ANP) | |||
5 | B, D | MAGNESIUM ION | non-polymer | 24.3 | 2 | Chemie (MG) | |||
6 | C | TRIS-HYDROXYMETHYL-METHYL-AMMONIUM | non-polymer | 122.1 | 1 | Chemie (144) | |||
7 | C, D | GLYCEROL | non-polymer | 92.1 | 5 | Chemie (GOL) | |||
8 | C, D | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 3 | Chemie (PEG) | |||
9 | water | water | 18.0 | 372 | Chemie (HOH) |
Sequence modifications
A, C: 1 - 243 (UniProt: A0A0H3JN63)
B, D: 1 - 437 (UniProt: A0A0D6HDA2)
PDB | External Database | Details |
---|---|---|
Leu 244 | - | expression tag |
Glu 245 | - | expression tag |
His 246 | - | expression tag |
His 247 | - | expression tag |
His 248 | - | expression tag |
His 249 | - | expression tag |
His 250 | - | expression tag |
His 251 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Val 39 | Ile 39 | conflict |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 155580.1 | |
Non-Polymers* | Number of molecules | 15 |
Total formula weight | 2092.8 | |
All* | Total formula weight | 157672.9 |