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6H10

Crystal Structure of KDM4D with tetrazolylhydrazide ligand NR073

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Lysine-specific demethylase 4Dpolymer34239491.81UniProt (Q6B0I6)
Pfam (PF02375)
Pfam (PF02373)
Homo sapiens (Human)JmjC domain-containing histone demethylation protein 3D,Jumonji domain-containing protein 2D
2B
(A)
ZINC IONnon-polymer65.41Chemie (ZN)
3C
(A)
CHLORIDE IONnon-polymer35.51Chemie (CL)
4D
(A)
SODIUM IONnon-polymer23.01Chemie (NA)
5E, F, G, H, I...
(A)
1,2-ETHANEDIOLnon-polymer62.19Chemie (EDO)
6N
(A)
SULFATE IONnon-polymer96.11Chemie (SO4)
7O
(A)
NICKEL (II) IONnon-polymer58.71Chemie (NI)
8P, Q
(A)
~{N}-[(~{E})-(4-methylphenyl)methylideneamino]-2-(2~{H}-1,2,3,4-tetrazol-5-yl)ethanamidenon-polymer244.32Chemie (FJ8)
9R
(A)
4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACIDnon-polymer238.31Chemie (EPE)
10S
(A)
waterwater18.0483Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight39491.8
Non-Polymers*Number of molecules17
Total formula weight1564.0
All*Total formula weight41055.8
*Water molecules are not included.

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