6GZ5

tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-3 (TI-POST-3)

This is a large structure.

Entity

Chain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
A228S ribosomal RNApolymer36121170164.91
Oryctolagus cuniculus (rabbit)
BvP/P-site-tRNApolymer7624437.51
Oryctolagus cuniculus (rabbit)
BxmRNApolymer113492.11
Enterobacteria phage SP6
BwE/E-site-tRNApolymer7624533.61
Saccharomyces cerevisiae (baker's yeast)
B118S ribosomal RNApolymer1708551108.21
Oryctolagus cuniculus (rabbit)
BDribosomal protein uS3polymer22024357.61
Oryctolagus cuniculus (rabbit)
BFribosomal protein uS7polymer19021424.81
Oryctolagus cuniculus (rabbit)
BKribosomal protein eS10polymer9811774.01
Oryctolagus cuniculus (rabbit)
BMribosomal protein eS12polymer12013393.71
Oryctolagus cuniculus (rabbit)
BPribosomal protein uS19polymer12014273.91
Oryctolagus cuniculus (rabbit)
BQribosomal protein uS9polymer13915765.51
Oryctolagus cuniculus (rabbit)
BRribosomal protein eS17polymer12514447.81
Oryctolagus cuniculus (rabbit)
BSribosomal protein uS13polymer13916383.11
Oryctolagus cuniculus (rabbit)
BTribosomal protein eS19polymer14315822.21
Oryctolagus cuniculus (rabbit)
BUribosomal protein uS10polymer9711029.11
Oryctolagus cuniculus (rabbit)
BZribosomal protein eS25polymer869801.71
Oryctolagus cuniculus (rabbit)
Bcribosomal protein eS28polymer627007.11
Oryctolagus cuniculus (rabbit)
Bdribosomal protein uS14polymer516121.21
Enterobacteria phage SP6
Bfribosomal protein eS31polymer738645.31
Oryctolagus cuniculus (rabbit)
Bgribosomal protein RACK 1polymer31434726.21
Oryctolagus cuniculus (rabbit)
BAribosomal protein uS2polymer21524245.71
Oryctolagus cuniculus (rabbit)
BBribosomal protein eS1polymer21224660.01
Oryctolagus cuniculus (rabbit)
BCribosomal protein uS5polymer22224575.01
Oryctolagus cuniculus (rabbit)
BEribosomal protein eS4polymer25728893.01
Oryctolagus cuniculus (rabbit)
BGribosomal protein eS6polymer23226913.91
Oryctolagus cuniculus (rabbit)
BHribosomal protein eS7polymer18320990.51
Oryctolagus cuniculus (rabbit)
BIribosomal protein eS8polymer20724132.21
Oryctolagus cuniculus (rabbit)
BJribosomal protein uS4polymer17921222.21
Oryctolagus cuniculus (rabbit)
BLribosomal protein uS17polymer15317910.21
Oryctolagus cuniculus (rabbit)
BNribosomal protein uS15polymer14917057.11
Oryctolagus cuniculus (rabbit)
BOribosomal protein uS11polymer13614544.71
Oryctolagus cuniculus (rabbit)
BVribosomal protein eS21polymer818863.11
Oryctolagus cuniculus (rabbit)
BWribosomal protein uS8polymer12914734.41
Oryctolagus cuniculus (rabbit)
BXribosomal protein uS12polymer14115626.41
Oryctolagus cuniculus (rabbit)
BYribosomal protein eS24polymer12514489.21
Oryctolagus cuniculus (rabbit)
Baribosomal protein eS26polymer9711087.11
Oryctolagus cuniculus (rabbit)
Bbribosomal protein eS27polymer809000.61
Oryctolagus cuniculus (rabbit)
Beribosomal protein eS30polymer556239.41
Oryctolagus cuniculus (rabbit)
A35.8S ribosomal RNApolymer15750449.81
Oryctolagus cuniculus (rabbit)
A45S ribosomal RNApolymer11938385.81
Oryctolagus cuniculus (rabbit)
AAribosomal protein uL2polymer25227456.21
Oryctolagus cuniculus (rabbit)
ABribosomal protein uL3polymer39445222.91
Oryctolagus cuniculus (rabbit)
ACribosomal protein uL4polymer36341171.51
Oryctolagus cuniculus (rabbit)
ADribosomal protein uL18polymer29434091.41
Oryctolagus cuniculus (rabbit)
AEribosomal protein eL6polymer19422262.41
Oryctolagus cuniculus (rabbit)
AFribosomal protein uL30polymer23427733.11
Oryctolagus cuniculus (rabbit)
AGribosomal protein eL8polymer23426724.61
Oryctolagus cuniculus (rabbit)
AHribosomal protein uL6polymer19121770.41
Oryctolagus cuniculus (rabbit)
AIribosomal protein uL16polymer20824150.51
Oryctolagus cuniculus (rabbit)
AJribosomal protein uL5polymer16919270.31
Oryctolagus cuniculus (rabbit)
ALribosomal protein eL13polymer20523574.71
Oryctolagus cuniculus (rabbit)
AMribosomal protein eL14polymer13916220.31
Oryctolagus cuniculus (rabbit)
ANribosomal protein eL15polymer20324076.11
Oryctolagus cuniculus (rabbit)
AOribosomal protein uL13polymer19522820.41
Oryctolagus cuniculus (rabbit)
APribosomal protein uL22polymer15317757.61
Oryctolagus cuniculus (rabbit)
AQribosomal protein eL18polymer18721556.51
Oryctolagus cuniculus (rabbit)
ARribosomal protein eL19polymer18121742.11
Oryctolagus cuniculus (rabbit)
ASribosomal protein eL20polymer17520661.31
Oryctolagus cuniculus (rabbit)
ATribosomal protein eL21polymer15718276.51
Oryctolagus cuniculus (rabbit)
AUribosomal protein eL22polymer9911481.21
Oryctolagus cuniculus (rabbit)
AVribosomal protein uL14polymer12913828.31
Oryctolagus cuniculus (rabbit)
AWribosomal protein eL24polymer12114087.41
Oryctolagus cuniculus (rabbit)
AXribosomal protein uL23polymer11713614.01
Oryctolagus cuniculus (rabbit)
AYribosomal protein uL24polymer12715161.91
Oryctolagus cuniculus (rabbit)
AZribosomal protein eL27polymer13415647.61
Oryctolagus cuniculus (rabbit)
Aaribosomal protein uL15polymer14716473.31
Oryctolagus cuniculus (rabbit)
Abribosomal protein eL29polymer687996.41
Oryctolagus cuniculus (rabbit)
Acribosomal protein eL30polymer10311500.61
Oryctolagus cuniculus (rabbit)
Adribosomal protein eL31polymer10612506.61
Oryctolagus cuniculus (rabbit)
Aeribosomal protein eL32polymer12915179.21
Oryctolagus cuniculus (rabbit)
Afribosomal protein eL33polymer10912433.51
Oryctolagus cuniculus (rabbit)
Agribosomal protein eL34polymer11412994.61
Oryctolagus cuniculus (rabbit)
Ahribosomal protein uL29polymer12214462.41
Oryctolagus cuniculus (rabbit)
Airibosomal protein eL36polymer9711373.71
Oryctolagus cuniculus (rabbit)
Ajribosomal protein eL37polymer849864.61
Oryctolagus cuniculus (rabbit)
Akribosomal protein eL38polymer698107.81
Oryctolagus cuniculus (rabbit)
Alribosomal protein eL39polymer506295.61
Oryctolagus cuniculus (rabbit)
Amribosomal protein eL40polymer505957.21
Oryctolagus cuniculus (rabbit)
Anribosomal protein eL41polymer253473.51
Oryctolagus cuniculus (rabbit)
Aoribosomal protein eL42polymer10512345.81
Oryctolagus cuniculus (rabbit)
Apribosomal protein eL43polymer9110168.21
Oryctolagus cuniculus (rabbit)
Atribosomal protein eL28polymer12213991.41
Oryctolagus cuniculus (rabbit)
Auribosomal protein uL1polymer21724879.41
Oryctolagus cuniculus (rabbit)
Aqribosomal protein uL11polymer15116290.81
Oryctolagus cuniculus (rabbit)
AKribosomal protein uL10polymer20222217.81
Oryctolagus cuniculus (rabbit)
Cteukaryotic elongation factor 2 (eEF2)polymer85395056.71
Oryctolagus cuniculus (rabbit)
MAGNESIUM IONnon-polymer24.3327
ZINC IONnon-polymer65.45
PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTERnon-polymer522.21

Sequence viewer

Contents of the asymmetric unit

PolymersNumber of chains86
Total molecular weight3316658.0
Non-Polymers*Number of molecules333
Total molecular weight8797.0
All*Total molecular weight3325454.9
*Water molecules are not included.