6GV4
High-resolution Cryo-EM of Fab-labeled human parechovirus 3
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | D | RNA (5'-R(*UP*GP*GP*UP*AP*UP*UP*U)-3') | polymer | 8 | 2505.5 | 1 | Human parechovirus 3 | ||
| 2 | A | VP0 | polymer | 289 | 31770.1 | 1 | UniProt (Q8BES5) Pfam (PF00073) In PDB | Human parechovirus 3 | |
| 3 | B | VP1 | polymer | 229 | 25913.1 | 1 | UniProt (Q8BES5) In PDB | Human parechovirus 3 | |
| 4 | C | VP3 | polymer | 256 | 28757.6 | 1 | UniProt (Q8BES5) UniProt (by SIFTS) (A0A291FGQ4) In PDB | Human parechovirus 3 | |
| 5 | H | AT12-015 antibody variable heavy | polymer | 121 | 13128.6 | 1 | Homo sapiens (Human) | ||
| 6 | L | AT12-015 antibody variable light | polymer | 113 | 12339.8 | 1 | Homo sapiens (Human) |
Sequence modifications
A: 1 - 289 (UniProt: Q8BES5)
C: 1 - 256 (UniProt: Q8BES5)
| PDB | External Database | Details |
|---|---|---|
| Glu 285 | Asp 285 | conflict |
| PDB | External Database | Details |
|---|---|---|
| Asn 118 | Ile 407 | conflict |
| Thr 121 | Asn 410 | conflict |
| Asp 123 | Ala 412 | conflict |
| Asn 129 | Thr 418 | conflict |
| Thr 134 | Ser 423 | conflict |
| Ser 141 | Phe 430 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 114414.7 | |
| All* | Total formula weight | 114414.7 |
