6GS8

Crystal structure of SmbA in complex with c-di-GMP

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A, B, C, D, E... (A, B, C, D, E...)	Uncharacterized protein	polymer	308	34084.9	6	UniProt (Q9A5E6)	Caulobacter vibrioides (strain ATCC 19089 / CB15)
2	G, H, J, K, M... (A, B, C, D, E...)	9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one)	non-polymer		690.4	12	Chemie (C2E) PubChem (135440063) PubChem (135566344) PubChem (136437725) PubChem (136465801) PubChem (136503951) PubChem (146177770) PubChem (173716374) PubChem (174009991) PubChem (135566464) PubChem (135625254) PubChem (135867623) PubChem (135975628) PubChem (136177399) PubChem (136443483) PubChem (137221491) PubChem (137295286) PubChem (148921766) PubChem (148921769) PubChem (164708340) PubChem (168270823)
3	I, L, O, R, U... (A, B, C, D, E...)	MAGNESIUM ION	non-polymer		24.3	6	Chemie (MG) PubChem (888)
4	AA, BA, CA, DA, Y... (C, D, E, F, A...)	water	water		18.0	30	Chemie (HOH)

Sequence modifications

A, B, C, D, E, F: 2 - 296 (UniProt: Q9A5E6)

PDB	External Database	Details
Mse 1	-	initiating methionine
Val 198	-	insertion
Lys 297	-	expression tag
Leu 298	-	expression tag
Ala 299	-	expression tag
Ala 300	-	expression tag
Ala 301	-	expression tag
Leu 302	-	expression tag
Glu 303	-	expression tag
His 304	-	expression tag
His 305	-	expression tag
His 306	-	expression tag
His 307	-	expression tag

Contents of the asymmetric unit

Polymers	Number of chains	6
	Total formula weight	204509.6
Non-Polymers*	Number of molecules	18
	Total formula weight	8430.8
All*	Total formula weight	212940.4

*Water molecules are not included.