6GS8
Crystal structure of SmbA in complex with c-di-GMP
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D, E... (A, B, C, D, E...) | Uncharacterized protein | polymer | 308 | 34084.9 | 6 | UniProt (Q9A5E6) | Caulobacter vibrioides (strain ATCC 19089 / CB15) | |
| 2 | G, H, J, K, M... (A, B, C, D, E...) | 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one) | non-polymer | 690.4 | 12 | Chemie (C2E) | |||
| 3 | I, L, O, R, U... (A, B, C, D, E...) | MAGNESIUM ION | non-polymer | 24.3 | 6 | Chemie (MG) | |||
| 4 | AA, BA, CA, DA, Y... (C, D, E, F, A...) | water | water | 18.0 | 30 | Chemie (HOH) |
Sequence modifications
A, B, C, D, E, F: 2 - 296 (UniProt: Q9A5E6)
| PDB | External Database | Details |
|---|---|---|
| Mse 1 | - | initiating methionine |
| Val 198 | - | insertion |
| Lys 297 | - | expression tag |
| Leu 298 | - | expression tag |
| Ala 299 | - | expression tag |
| Ala 300 | - | expression tag |
| Ala 301 | - | expression tag |
| Leu 302 | - | expression tag |
| Glu 303 | - | expression tag |
| His 304 | - | expression tag |
| His 305 | - | expression tag |
| His 306 | - | expression tag |
| His 307 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 204509.6 | |
| Non-Polymers* | Number of molecules | 18 |
| Total formula weight | 8430.8 | |
| All* | Total formula weight | 212940.4 |






