6GRE
Crystal structure of the tandem DUF26 ectodomain from the Arabidopsis thaliana cysteine-rich receptor-like protein PDLP5.
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B | Cysteine-rich repeat secretory protein 2 | polymer | 228 | 24213.8 | 2 | UniProt (Q8GUJ2) Pfam (PF01657) In PDB | Arabidopsis thaliana (thale cress) | Cysteine-rich repeat protein HWI1,Plasmodesmata-located protein 5,PDLP5,Protein HOPW1-1-INDUCED 1 |
2 | C, D, E | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 3 | In PDB GlyTouCan (G42666HT) | |||
3 | A | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 1 | Chemie (NAG) | |||
4 | A, B | 1,2-ETHANEDIOL | non-polymer | 62.1 | 7 | Chemie (EDO) | |||
5 | A, B | SODIUM ION | non-polymer | 23.0 | 2 | Chemie (NA) | |||
6 | A, B | SULFATE ION | non-polymer | 96.1 | 2 | Chemie (SO4) | |||
7 | B | GLYCEROL | non-polymer | 92.1 | 1 | Chemie (GOL) | |||
8 | B | 2-(2-ETHOXYETHOXY)ETHANOL | non-polymer | 134.2 | 1 | Chemie (AE3) | |||
9 | water | water | 18.0 | 310 | Chemie (HOH) |
Sequence modifications
A, B: 26 - 241 (UniProt: Q8GUJ2)
PDB | External Database | Details |
---|---|---|
Met 24 | - | initiating methionine |
Gly 25 | - | expression tag |
Leu 242 | - | expression tag |
Glu 243 | - | expression tag |
Gly 244 | - | expression tag |
Ser 245 | - | expression tag |
Glu 246 | - | expression tag |
Asn 247 | - | expression tag |
Leu 248 | - | expression tag |
Tyr 249 | - | expression tag |
Phe 250 | - | expression tag |
Gln 251 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 48427.7 | |
Branched | Number of molecules | 3 |
Total formula weight | 1273.2 | |
Non-Polymers* | Number of molecules | 14 |
Total formula weight | 1120.1 | |
All* | Total formula weight | 50820.9 |