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6G3O

Crystal structure of human HDAC2 in complex with (R)-6-[3,4-Dioxo-2-(4-trifluoromethoxy-phenylamino)-cyclobut-1-enylamino]-heptanoic acid hydroxyamide

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C
(A, B, C)
Histone deacetylase 2polymer37042424.33UniProt (Q92769)
Pfam (PF00850)
Homo sapiens (Human)HD2
2D, H, O
(A, B, C)
ZINC IONnon-polymer65.43Chemie (ZN)
3E, I, P
(A, B, C)
CALCIUM IONnon-polymer40.13Chemie (CA)
4F, J, Q
(A, B, C)
SODIUM IONnon-polymer23.03Chemie (NA)
5G, K, R
(A, B, C)
(6~{R})-6-[[3,4-bis(oxidanylidene)-2-[[4-(trifluoromethyloxy)phenyl]amino]cyclobuten-1-yl]amino]-~{N}-oxidanyl-heptanamidenon-polymer415.43Chemie (EL8)
6L
(B)
PENTAETHYLENE GLYCOLnon-polymer238.31Chemie (1PE)
7M, S
(B, C)
SULFATE IONnon-polymer96.12Chemie (SO4)
8N
(B)
TETRAETHYLENE GLYCOLnon-polymer194.21Chemie (PG4)
9T, U, V
(A, B, C)
waterwater18.0469Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight127272.9
Non-Polymers*Number of molecules16
Total formula weight2256.2
All*Total formula weight129529.0
*Water molecules are not included.

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PDB entries from 2025-12-24

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