6FX1
Crystal structure of Pholiota squarrosa lectin in complex with an octasaccharide
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D, E... (A, B, C, D, E...) | lectin | polymer | 43 | 4711.3 | 12 | UniProt (by SIFTS) (A0A3B6UEU4) | Pholiota squarrosa | |
| 2 | M, O, R, X (M, O, R, X) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]1-azido-beta-N-acetyl-D-glucosamine | branched | 1123.0 | 4 | In PDB GlyTouCan (G53233QZ) | |||
| 3 | N, U (N, U) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]1-azido-beta-N-acetyl-D-glucosamine | branched | 1488.4 | 2 | In PDB GlyTouCan (G12228DK) | |||
| 4 | P (P) | alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]1-azido-beta-N-acetyl-D-glucosamine | branched | 919.8 | 1 | In PDB GlyTouCan (G15526KS) | |||
| 5 | Q, S (Q, S) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]1-azido-beta-N-acetyl-D-glucosamine | branched | 1285.2 | 2 | In PDB GlyTouCan (G70122IR) | |||
| 6 | T, V, W (T, V, W) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]1-azido-beta-N-acetyl-D-glucosamine | branched | 757.7 | 3 | In PDB GlyTouCan (G02611HY) | |||
| 7 | AA, BA, CA, DA, EA... (B, C, D, E, F...) | MALONATE ION | non-polymer | 102.0 | 12 | Chemie (MLI) | |||
| 8 | Z (A) | 3-OXOOCTANOIC ACID | non-polymer | 158.2 | 1 | Chemie (OOA) | |||
| 9 | LA, MA, NA, OA, PA... (A, B, C, D, E...) | water | water | 18.0 | 316 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 12 |
| Total formula weight | 56535.3 | |
| Branched | Number of molecules | 12 |
| Total formula weight | 13232.1 | |
| Non-Polymers* | Number of molecules | 13 |
| Total formula weight | 1382.7 | |
| All* | Total formula weight | 71150.1 |
