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6FML

CryoEM Structure INO80core Nucleosome complex

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C
(A, B, C)
RuvB-like helicasepolymer46250451.83UniProt (G0RYI5)
Pfam (PF06068)
Pfam (PF17856)
Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719)
2D, E, F
(D, E, F)
RuvB-like helicasepolymer48853212.73UniProt (G0RYC2)
Pfam (PF06068)
Pfam (PF17856)
Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719)
3G
(G)
Ino80polymer1856210443.31Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719)
4H
(H)
les2polymer49152018.51UniProt (G0RY01)
Pfam (PF04795)
Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719)
5I
(I)
Ies6polymer21923127.51UniProt (G0S590)
Pfam (PF08265)
Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719)
6J
(J)
Actin related protein 5polymer77085996.51UniProt (G0S589)
Pfam (PF00022)
Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719)
7K
(K)
Nucleosomal DNA Strand 1polymer19660652.61synthetic construct
8L
(L)
Nucleosomal DNA Strand 2polymer19660376.41synthetic construct
9M, Q
(M, Q)
Histone H3.2polymer13515289.92UniProt (Q71DI3)
Pfam (PF00125)
Homo sapiens (Human)Histone H3/m,Histone H3/o
10N, R
(N, R)
Histone H4polymer10211263.22UniProt (P62805)
Pfam (PF15511)
Homo sapiens (Human)
11O, S
(O, S)
Histone H2A type 1polymer12913990.32UniProt (P0C0S9)
Pfam (PF00125)
Pfam (PF16211)
UniProt (by SIFTS) (P0C0S8)
Homo sapiens (Human)
12P, T
(P, T)
Histone H2B type 1-C/E/F/G/Ipolymer12513806.02UniProt (P62807)
Pfam (PF00125)
Homo sapiens (Human)Histone H2B.1 A,Histone H2B.a,H2B/a,Histone H2B.g,H2B/g,Histone H2B.h,H2B/h,Histone H2B.k,H2B/k,Histone H2B.l,H2B/l
13U, V, W, X, Y...
(A, B, C, D, E...)
ADENOSINE-5'-DIPHOSPHATEnon-polymer427.26Chemie (ADP)
14AA
(J)
ADENOSINE-5'-TRIPHOSPHATEnon-polymer507.21Chemie (ATP)
Sequence modifications
H: 2 - 383 (UniProt: G0RY01)
H: 384 - 414 (PDB: 6FML)
H: 415 - 492 (UniProt: G0RY01)
J: 1 - 470 (UniProt: G0S589)
J: 471 - 498 (PDB: 6FML)
J: 498 - 498 (PDB: 6FML)
J: 498 - 519 (PDB: 6FML)
J: 519 - 520 (UniProt: G0S589)
J: 520 - 584 (PDB: 6FML)
J: 586 - 769 (UniProt: G0S589)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains20
Total formula weight912307.7
Non-Polymers*Number of molecules7
Total formula weight3070.4
All*Total formula weight915378.1
*Water molecules are not included.

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PDB entries from 2024-10-30

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