6FML
CryoEM Structure INO80core Nucleosome complex
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C (A, B, C) | RuvB-like helicase | polymer | 462 | 50451.8 | 3 | UniProt (G0RYI5) Pfam (PF06068) Pfam (PF17856) | Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719) | |
2 | D, E, F (D, E, F) | RuvB-like helicase | polymer | 488 | 53212.7 | 3 | UniProt (G0RYC2) Pfam (PF06068) Pfam (PF17856) | Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719) | |
3 | G (G) | Ino80 | polymer | 1856 | 210443.3 | 1 | Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719) | ||
4 | H (H) | les2 | polymer | 491 | 52018.5 | 1 | UniProt (G0RY01) Pfam (PF04795) | Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719) | |
5 | I (I) | Ies6 | polymer | 219 | 23127.5 | 1 | UniProt (G0S590) Pfam (PF08265) | Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719) | |
6 | J (J) | Actin related protein 5 | polymer | 770 | 85996.5 | 1 | UniProt (G0S589) Pfam (PF00022) | Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719) | |
7 | K (K) | Nucleosomal DNA Strand 1 | polymer | 196 | 60652.6 | 1 | synthetic construct | ||
8 | L (L) | Nucleosomal DNA Strand 2 | polymer | 196 | 60376.4 | 1 | synthetic construct | ||
9 | M, Q (M, Q) | Histone H3.2 | polymer | 135 | 15289.9 | 2 | UniProt (Q71DI3) Pfam (PF00125) | Homo sapiens (Human) | Histone H3/m,Histone H3/o |
10 | N, R (N, R) | Histone H4 | polymer | 102 | 11263.2 | 2 | UniProt (P62805) Pfam (PF15511) | Homo sapiens (Human) | |
11 | O, S (O, S) | Histone H2A type 1 | polymer | 129 | 13990.3 | 2 | UniProt (P0C0S9) Pfam (PF00125) Pfam (PF16211) UniProt (by SIFTS) (P0C0S8) | Homo sapiens (Human) | |
12 | P, T (P, T) | Histone H2B type 1-C/E/F/G/I | polymer | 125 | 13806.0 | 2 | UniProt (P62807) Pfam (PF00125) | Homo sapiens (Human) | Histone H2B.1 A,Histone H2B.a,H2B/a,Histone H2B.g,H2B/g,Histone H2B.h,H2B/h,Histone H2B.k,H2B/k,Histone H2B.l,H2B/l |
13 | U, V, W, X, Y... (A, B, C, D, E...) | ADENOSINE-5'-DIPHOSPHATE | non-polymer | 427.2 | 6 | Chemie (ADP) | |||
14 | AA (J) | ADENOSINE-5'-TRIPHOSPHATE | non-polymer | 507.2 | 1 | Chemie (ATP) |
Sequence modifications
H: 2 - 383 (UniProt: G0RY01)
H: 384 - 414 (PDB: 6FML)
H: 415 - 492 (UniProt: G0RY01)
J: 1 - 470 (UniProt: G0S589)
J: 471 - 498 (PDB: 6FML)
J: 498 - 498 (PDB: 6FML)
J: 498 - 519 (PDB: 6FML)
J: 519 - 520 (UniProt: G0S589)
J: 520 - 584 (PDB: 6FML)
J: 586 - 769 (UniProt: G0S589)
H: 384 - 414 (PDB: 6FML)
H: 415 - 492 (UniProt: G0RY01)
J: 1 - 470 (UniProt: G0S589)
J: 471 - 498 (PDB: 6FML)
J: 498 - 498 (PDB: 6FML)
J: 498 - 519 (PDB: 6FML)
J: 519 - 520 (UniProt: G0S589)
J: 520 - 584 (PDB: 6FML)
J: 586 - 769 (UniProt: G0S589)
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 20 |
Total formula weight | 912307.7 | |
Non-Polymers* | Number of molecules | 7 |
Total formula weight | 3070.4 | |
All* | Total formula weight | 915378.1 |