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6FMK

pVHL:EloB:EloC in complex with N-((S)-1-((2S,4R)-4-hydroxy-2-((4-(4-methylthiazol-5-yl)benzyl)carbamothioyl) pyrrolidin-1-yl)-1-thioxopropan-2-yl)acetamide (ligand 4)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, D, G, JElongin-Bpolymer10411956.44UniProt (Q15370)
Pfam (PF00240)
In PDB
Homo sapiens (Human)EloB,Elongin 18 kDa subunit,RNA polymerase II transcription factor SIII subunit B,SIII p18,Transcription elongation factor B polypeptide 2
2B, E, H, KElongin-Cpolymer9710974.64UniProt (Q15369)
Pfam (PF03931)
In PDB
Homo sapiens (Human)EloC,Elongin 15 kDa subunit,RNA polymerase II transcription factor SIII subunit C,SIII p15,Transcription elongation factor B polypeptide 1
3C, F, I, Lvon Hippel-Lindau disease tumor suppressorpolymer15317738.04UniProt (P40337)
Pfam (PF01847)
Pfam (PF17211)
In PDB
Homo sapiens (Human)Protein G7,pVHL
4C, F, I, L~{N}-[(2~{S})-1-[(2~{S},4~{R})-2-[[4-(4-methyl-1,3-thiazol-5-yl)phenyl]methylcarbamothioyl]-4-oxidanyl-pyrrolidin-1-yl]-1-sulfanylidene-propan-2-yl]ethanamidenon-polymer462.74Chemie (DV8)
5waterwater18.0400Chemie (HOH)
Sequence modifications
B, E, H, K: 17 - 112 (UniProt: Q15369)
PDBExternal DatabaseDetails
Met 16-initiating methionine
C, F, I, L: 54 - 204 (UniProt: P40337)
PDBExternal DatabaseDetails
Gly 52-expression tag
Ser 53-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains12
Total formula weight162676.1
Non-Polymers*Number of molecules4
Total formula weight1850.6
All*Total formula weight164526.7
*Water molecules are not included.

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PDB entries from 2024-07-10

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