6FKN
Drosophila Plexin A in complex with Semaphorin 1b
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C (A, C) | Plexin A, isoform A | polymer | 715 | 78699.4 | 2 | UniProt (Q9V491) Pfam (PF01403) Pfam (PF01437) Pfam (PF17960) | Drosophila melanogaster (Fruit fly) | |
| 2 | B, D (B, D) | MIP07328p | polymer | 578 | 64212.4 | 2 | UniProt (Q7KK54) Pfam (PF01403) Pfam (PF01437) | Drosophila melanogaster (Fruit fly) | Sema-1b,isoform A,isoform B,isoform C,Semaphorin-like |
| 3 | E (E) | alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 748.7 | 1 | In PDB GlyTouCan (G81315DD) | |||
| 4 | F (F) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 1 | In PDB GlyTouCan (G15407YE) | |||
| 5 | G, H (G, H) | alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 910.8 | 2 | In PDB GlyTouCan (G22768VO) | |||
| 6 | I, J, K, L, M... (A, C) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 6 | Chemie (NAG) |
Sequence modifications
A, C: 28 - 730 (UniProt: Q9V491)
B, D: 37 - 602 (UniProt: Q7KK54)
| PDB | External Database | Details |
|---|---|---|
| Glu 25 | - | expression tag |
| Thr 26 | - | expression tag |
| Gly 27 | - | expression tag |
| Gly 731 | - | expression tag |
| Thr 732 | - | expression tag |
| Lys 733 | - | expression tag |
| His 734 | - | expression tag |
| His 735 | - | expression tag |
| His 736 | - | expression tag |
| His 737 | - | expression tag |
| His 738 | - | expression tag |
| His 739 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Glu 34 | - | expression tag |
| Thr 35 | - | expression tag |
| Gly 36 | - | expression tag |
| Gly 603 | - | expression tag |
| Thr 604 | - | expression tag |
| Lys 605 | - | expression tag |
| His 606 | - | expression tag |
| His 607 | - | expression tag |
| His 608 | - | expression tag |
| His 609 | - | expression tag |
| His 610 | - | expression tag |
| His 611 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 285823.6 | |
| Branched | Number of molecules | 4 |
| Total formula weight | 3156.9 | |
| Non-Polymers* | Number of molecules | 6 |
| Total formula weight | 1327.2 | |
| All* | Total formula weight | 290307.7 |
